RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 ADAMTSL1Q8N6G6 1762 aa9.71□□□□□ -0.85
SCAP-212ENST00000487942 HCLS1P14317 486 aaPredicted RBP9.71□□□□□ -0.86
SCAP-212ENST00000487942 ALDH1B1P30837 517 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 HOXA10P31260 410 aaPredicted RBP9.71□□□□□ -0.86
SCAP-212ENST00000487942 APLP1P51693 650 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.86
SCAP-212ENST00000487942 TCIRG1Q13488 830 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 PARP10Q53GL7 1025 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 NLRP10Q86W26 655 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 DNAJC5GQ8N7S2 189 aa9.71□□□□□ -0.86
SCAP-212ENST00000487942 RPGRQ92834 1020 aaKnown RBP9.71□□□□□ -0.86
SCAP-212ENST00000487942 UTP14AQ9BVJ6 771 aaKnown RBP9.71□□□□□ -0.86
SCAP-212ENST00000487942 POLR2AP24928 1970 aaKnown RBP9.71□□□□□ -0.86
SCAP-212ENST00000487942 HOXB7P09629 217 aa9.7□□□□□ -0.86
SCAP-212ENST00000487942 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
SCAP-212ENST00000487942 FSTL1Q12841 308 aa9.7□□□□□ -0.86
SCAP-212ENST00000487942 SLC10A5Q5PT55 438 aa9.7□□□□□ -0.86
SCAP-212ENST00000487942 RTKN2Q8IZC4 609 aa9.7□□□□□ -0.86
SCAP-212ENST00000487942 C8orf58Q8NAV2 365 aa9.7□□□□□ -0.86
SCAP-212ENST00000487942 CRAMP1Q96RY5 1269 aa9.7□□□□□ -0.86
SCAP-212ENST00000487942 ATP5J2-PTCD1G3V325 749 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 PPEF1O14829 653 aaPredicted RBP9.69□□□□□ -0.86
SCAP-212ENST00000487942 ABCC4O15439 1325 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 ZEB1P37275 1124 aaPredicted RBP9.69□□□□□ -0.86
SCAP-212ENST00000487942 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 SMC1BQ8NDV3 1235 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
SCAP-212ENST00000487942 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 TRPM7Q96QT4 1865 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 PHAXQ9H814 394 aaKnown RBP9.69□□□□□ -0.86
SCAP-212ENST00000487942 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
SCAP-212ENST00000487942 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
SCAP-212ENST00000487942 TRMT112Q9UI30 125 aaKnown RBP9.69□□□□□ -0.86
SCAP-212ENST00000487942 DUOX1Q9NRD9 1551 aa9.68□□□□□ -0.86
SCAP-212ENST00000487942 GNAI1P63096 354 aa9.68□□□□□ -0.86
SCAP-212ENST00000487942 HSP90AB3PQ58FF7 597 aa9.68□□□□□ -0.86
SCAP-212ENST00000487942 RTL5Q5HYW3 569 aaPredicted RBP9.68□□□□□ -0.86
SCAP-212ENST00000487942 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
SCAP-212ENST00000487942 PSMD1Q99460 953 aa9.68□□□□□ -0.86
SCAP-212ENST00000487942 ISCA1Q9BUE6 129 aa9.68□□□□□ -0.86
SCAP-212ENST00000487942 SCN9AQ15858 1988 aa9.68□□□□□ -0.86
SCAP-212ENST00000487942 SH3TC1Q8TE82 1336 aa9.67□□□□□ -0.86
SCAP-212ENST00000487942 FZD9O00144 591 aa9.67□□□□□ -0.86
SCAP-212ENST00000487942 PDE4AP27815 886 aa9.67□□□□□ -0.86
SCAP-212ENST00000487942 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
SCAP-212ENST00000487942 FAM89AQ96GI7 184 aa9.67□□□□□ -0.86
SCAP-212ENST00000487942 HYPKQ9NX55 129 aa9.67□□□□□ -0.86
SCAP-212ENST00000487942 PSME4Q14997 1843 aa9.66□□□□□ -0.86
SCAP-212ENST00000487942 RNF123Q5XPI4 1314 aa9.66□□□□□ -0.86
SCAP-212ENST00000487942 CC2D2BQ6DHV5 1058 aa9.66□□□□□ -0.86
SCAP-212ENST00000487942 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
SCAP-212ENST00000487942 JARID2Q92833 1246 aaPredicted RBP9.66□□□□□ -0.86
SCAP-212ENST00000487942 TAF1DQ9H5J8 278 aaPredicted RBP9.66□□□□□ -0.86
SCAP-212ENST00000487942 MRS2Q9HD23 443 aa9.66□□□□□ -0.86
SCAP-212ENST00000487942 ATP6V0A2Q9Y487 856 aa9.66□□□□□ -0.86
SCAP-212ENST00000487942 TBC1D12O60347 775 aa9.65□□□□□ -0.86
SCAP-212ENST00000487942 CALD1Q05682 793 aaKnown RBP9.65□□□□□ -0.86
SCAP-212ENST00000487942 AOC3Q16853 763 aa9.65□□□□□ -0.86
SCAP-212ENST00000487942 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.86
SCAP-212ENST00000487942 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
SCAP-212ENST00000487942 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
SCAP-212ENST00000487942 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
SCAP-212ENST00000487942 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
SCAP-212ENST00000487942 ANP32CO43423 234 aa9.64□□□□□ -0.87
SCAP-212ENST00000487942 LSM11P83369 360 aaKnown RBP eCLIP9.64□□□□□ -0.87
SCAP-212ENST00000487942 EAPPQ56P03 285 aaPredicted RBP9.64□□□□□ -0.87
SCAP-212ENST00000487942 DDX46Q7L014 1031 aaKnown RBP9.64□□□□□ -0.87
SCAP-212ENST00000487942 SP8Q8IXZ3 490 aa9.64□□□□□ -0.87
SCAP-212ENST00000487942 JDP2Q8WYK2 163 aa9.64□□□□□ -0.87
SCAP-212ENST00000487942 CELF1Q92879 486 aaKnown RBP9.64□□□□□ -0.87
SCAP-212ENST00000487942 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
SCAP-212ENST00000487942 MYD88Q99836 296 aa9.64□□□□□ -0.87
SCAP-212ENST00000487942 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
SCAP-212ENST00000487942 GJA3Q9Y6H8 435 aa9.64□□□□□ -0.87
SCAP-212ENST00000487942 ZNF646O15015 1829 aaPredicted RBP9.63□□□□□ -0.87
SCAP-212ENST00000487942 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 IQCA1LA6NCM1 817 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 PPIP5K2O43314 1243 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 BBOX1O75936 387 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 EPHX2P34913 555 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 TRIM28Q13263 835 aaKnown RBP9.63□□□□□ -0.87
SCAP-212ENST00000487942 GRAPQ13588 217 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 CCDC27Q2M243 656 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 G2E3Q7L622 706 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 GPC2Q8N158 579 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 GRAPLQ8TC17 118 aaPredicted RBP9.63□□□□□ -0.87
SCAP-212ENST00000487942 HACL1Q9UJ83 578 aa9.63□□□□□ -0.87
SCAP-212ENST00000487942 IRS4O14654 1257 aaPredicted RBP9.62□□□□□ -0.87
SCAP-212ENST00000487942 EPS15P42566 896 aa9.62□□□□□ -0.87
SCAP-212ENST00000487942 SCNN1DP51172 638 aa9.62□□□□□ -0.87
SCAP-212ENST00000487942 EIF6P56537 245 aaKnown RBP9.62□□□□□ -0.87
SCAP-212ENST00000487942 SF3B3Q15393 1217 aaKnown RBP9.62□□□□□ -0.87
SCAP-212ENST00000487942 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
SCAP-212ENST00000487942 CCDC30Q5VVM6 783 aa9.62□□□□□ -0.87
SCAP-212ENST00000487942 DPP8Q6V1X1 898 aaPredicted RBP9.62□□□□□ -0.87
SCAP-212ENST00000487942 LDHDQ86WU2 507 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms