RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
BRCA1-217ENST00000487825 FAM35AQ86V20 835 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 SEPT3Q9UH03 358 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 GRIN2AQ12879 1464 aa8.64□□□□□ -1.03
BRCA1-217ENST00000487825 NID1P14543 1247 aa8.64□□□□□ -1.03
BRCA1-217ENST00000487825 SCNN1AP37088 669 aa8.64□□□□□ -1.03
BRCA1-217ENST00000487825 CD163Q86VB7 1156 aa8.64□□□□□ -1.03
BRCA1-217ENST00000487825 NUP160Q12769 1436 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 PPRC1Q5VV67 1664 aaKnown RBP8.63□□□□□ -1.03
BRCA1-217ENST00000487825 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 ZBTB42B2RXF5 422 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 RGS9O75916 674 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-217ENST00000487825 SPATA31C1P0DKV0 1188 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 CHRNA4P43681 627 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 PRRT3Q5FWE3 981 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 KCNMB2Q9Y691 235 aa8.63□□□□□ -1.03
BRCA1-217ENST00000487825 ADCY10Q96PN6 1610 aa8.62□□□□□ -1.03
BRCA1-217ENST00000487825 ADAMTS12P58397 1594 aa8.62□□□□□ -1.03
BRCA1-217ENST00000487825 ZBTB39O15060 712 aa8.62□□□□□ -1.03
BRCA1-217ENST00000487825 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-217ENST00000487825 EGFRP00533 1210 aa8.62□□□□□ -1.03
BRCA1-217ENST00000487825 TRIM28Q13263 835 aaKnown RBP8.62□□□□□ -1.03
BRCA1-217ENST00000487825 HFE2Q6ZVN8 426 aa8.62□□□□□ -1.03
BRCA1-217ENST00000487825 STIM2Q9P246 746 aa8.62□□□□□ -1.03
BRCA1-217ENST00000487825 CARNS1A5YM72 827 aa8.61□□□□□ -1.03
BRCA1-217ENST00000487825 ZAP70P43403 619 aa8.61□□□□□ -1.03
BRCA1-217ENST00000487825 TRIP4Q15650 581 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-217ENST00000487825 PCSK7Q16549 785 aa8.61□□□□□ -1.03
BRCA1-217ENST00000487825 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
BRCA1-217ENST00000487825 TMEM88BA6NKF7 163 aa8.6□□□□□ -1.03
BRCA1-217ENST00000487825 AFF1P51825 1210 aaKnown RBP8.6□□□□□ -1.03
BRCA1-217ENST00000487825 SUZ12Q15022 739 aaKnown RBP8.6□□□□□ -1.03
BRCA1-217ENST00000487825 PERM1Q5SV97 790 aa8.6□□□□□ -1.03
BRCA1-217ENST00000487825 ELMSAN1Q6PJG2 1045 aa8.6□□□□□ -1.03
BRCA1-217ENST00000487825 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
BRCA1-217ENST00000487825 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
BRCA1-217ENST00000487825 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
BRCA1-217ENST00000487825 CUX1P39880 1505 aa8.59□□□□□ -1.03
BRCA1-217ENST00000487825 UBAP1LF5GYI3 381 aa8.59□□□□□ -1.03
BRCA1-217ENST00000487825 MMP20O60882 483 aa8.59□□□□□ -1.03
BRCA1-217ENST00000487825 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-217ENST00000487825 BAG6P46379 1132 aa8.59□□□□□ -1.03
BRCA1-217ENST00000487825 GRIK4Q16099 956 aa8.59□□□□□ -1.03
BRCA1-217ENST00000487825 J3QW42 95 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 APBA3O96018 575 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 PSAPP07602 524 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 NRLP54845 237 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 GPLD1P80108 840 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 PLAURQ03405 335 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 DMRTC2Q8IXT2 367 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-217ENST00000487825 LPIN3Q9BQK8 851 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 FAM13BQ9NYF5 915 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
BRCA1-217ENST00000487825 EIF2AK2P19525 551 aaKnown RBP8.57□□□□□ -1.04
BRCA1-217ENST00000487825 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
BRCA1-217ENST00000487825 ATCAYQ86WG3 371 aa8.57□□□□□ -1.04
BRCA1-217ENST00000487825 ABTB2Q8N961 1025 aa8.57□□□□□ -1.04
BRCA1-217ENST00000487825 NSUN5Q96P11 429 aaKnown RBP8.57□□□□□ -1.04
BRCA1-217ENST00000487825 SMG9Q9H0W8 520 aaKnown RBP8.57□□□□□ -1.04
BRCA1-217ENST00000487825 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
BRCA1-217ENST00000487825 SUPT5HO00267 1087 aaKnown RBP8.56□□□□□ -1.04
BRCA1-217ENST00000487825 FURINP09958 794 aa8.56□□□□□ -1.04
BRCA1-217ENST00000487825 ILDR2Q71H61 639 aa8.56□□□□□ -1.04
BRCA1-217ENST00000487825 ARID3AQ99856 593 aa8.56□□□□□ -1.04
BRCA1-217ENST00000487825 ABCA10Q8WWZ4 1543 aa8.55□□□□□ -1.04
BRCA1-217ENST00000487825 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
BRCA1-217ENST00000487825 SSFA2P28290 1259 aa8.55□□□□□ -1.04
BRCA1-217ENST00000487825 SIK1P57059 783 aa8.55□□□□□ -1.04
BRCA1-217ENST00000487825 RAC1P63000 192 aa8.55□□□□□ -1.04
BRCA1-217ENST00000487825 GTF3C2Q8WUA4 911 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-217ENST00000487825 FRRS1LQ9P0K9 344 aa8.55□□□□□ -1.04
BRCA1-217ENST00000487825 FNDC3AQ9Y2H6 1198 aaKnown RBP8.55□□□□□ -1.04
BRCA1-217ENST00000487825 PRG4Q92954 1404 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-217ENST00000487825 GATA4P43694 442 aa8.54□□□□□ -1.04
BRCA1-217ENST00000487825 DOC2BQ14184 412 aa8.54□□□□□ -1.04
BRCA1-217ENST00000487825 GRIK5Q16478 980 aa8.54□□□□□ -1.04
BRCA1-217ENST00000487825 HELQQ8TDG4 1101 aa8.54□□□□□ -1.04
BRCA1-217ENST00000487825 GLI2P10070 1586 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 GHRHP01286 108 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 WFDC8Q8IUA0 241 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 NUDT16Q96DE0 195 aaKnown RBP8.53□□□□□ -1.04
BRCA1-217ENST00000487825 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
BRCA1-217ENST00000487825 ELNP15502 786 aa8.52□□□□□ -1.05
BRCA1-217ENST00000487825 SOX18P35713 384 aa8.52□□□□□ -1.05
BRCA1-217ENST00000487825 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-217ENST00000487825 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
BRCA1-217ENST00000487825 NACC1Q96RE7 527 aa8.52□□□□□ -1.05
BRCA1-217ENST00000487825 ADAM23O75077 832 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 SELPP16109 830 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 MPSTP25325 297 aa8.51□□□□□ -1.05
BRCA1-217ENST00000487825 DNM1Q05193 864 aaKnown RBP8.51□□□□□ -1.05
BRCA1-217ENST00000487825 NOM1Q5C9Z4 860 aaKnown RBP8.51□□□□□ -1.05
BRCA1-217ENST00000487825 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-217ENST00000487825 PHLDB3Q6NSJ2 640 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms