RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 NEUROD6Q96NK8 337 aa11.47□□□□□ -0.57
SF3B1-211ENST00000487698 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
SF3B1-211ENST00000487698 CNNM1Q9NRU3 951 aa11.47□□□□□ -0.57
SF3B1-211ENST00000487698 MROH5Q6ZUA9 1318 aa11.47□□□□□ -0.57
SF3B1-211ENST00000487698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
SF3B1-211ENST00000487698 PDE8BO95263 885 aa11.46□□□□□ -0.57
SF3B1-211ENST00000487698 ATP2B3Q16720 1220 aa11.46□□□□□ -0.57
SF3B1-211ENST00000487698 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
SF3B1-211ENST00000487698 HIP1O00291 1037 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 GYS1P13807 737 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 ADORA1P30542 326 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 BECN1Q14457 450 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 NFIXQ14938 502 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 EDC3Q96F86 508 aaKnown RBP11.45□□□□□ -0.58
SF3B1-211ENST00000487698 XAGE2Q96GT9 111 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 DIAPH3Q9NSV4 1193 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 RAD50Q92878 1312 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 APBA3O96018 575 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 FGFR2P21802 821 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 CWC27Q6UX04 472 aaKnown RBP11.45□□□□□ -0.58
SF3B1-211ENST00000487698 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 IL17RAQ96F46 866 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 FSD1Q9BTV5 496 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 NRXN2Q9P2S2 1712 aa11.45□□□□□ -0.58
SF3B1-211ENST00000487698 TICAM2Q86XR7 235 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 SNX21Q969T3 373 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 CDC5LQ99459 802 aaKnown RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 NDUFB9Q9Y6M9 179 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 MYO5AQ9Y4I1 1855 aaKnown RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 IGHMBP2P38935 993 aaKnown RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 ZNF827Q17R98 1081 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 ZNF512BQ96KM6 892 aaPredicted RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 DNAJC2Q99543 621 aaKnown RBP11.44□□□□□ -0.58
SF3B1-211ENST00000487698 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 DOCK2Q92608 1830 aa11.44□□□□□ -0.58
SF3B1-211ENST00000487698 NMIQ13287 307 aaPredicted RBP11.43□□□□□ -0.58
SF3B1-211ENST00000487698 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
SF3B1-211ENST00000487698 KBTBD3Q8NAB2 608 aa11.43□□□□□ -0.58
SF3B1-211ENST00000487698 FAM227BQ96M60 508 aa11.43□□□□□ -0.58
SF3B1-211ENST00000487698 PAG1Q9NWQ8 432 aa11.43□□□□□ -0.58
SF3B1-211ENST00000487698 A0A0D9SFI3 127 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 IFIT1P09914 478 aaKnown RBP11.42□□□□□ -0.58
SF3B1-211ENST00000487698 TM4SF1P30408 202 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 RABEP1Q15276 862 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 DDX46Q7L014 1031 aaKnown RBP11.42□□□□□ -0.58
SF3B1-211ENST00000487698 LPIN2Q92539 896 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
SF3B1-211ENST00000487698 ANKRD31Q8N7Z5 1873 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 HSPA4P34932 840 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 ANAPC15P60006 121 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 TTC39AQ5SRH9 613 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 GORABQ5T7V8 394 aa11.42□□□□□ -0.58
SF3B1-211ENST00000487698 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
SF3B1-211ENST00000487698 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
SF3B1-211ENST00000487698 GOLIM4O00461 696 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 MCCP23508 829 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 CHRNDQ07001 517 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 SCARF1Q14162 830 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 PRR5LQ6MZQ0 368 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 ANKRD18AQ8IVF6 992 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 CNBD1Q8NA66 436 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 PALD1Q9ULE6 856 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 CCDC171Q6TFL3 1326 aa11.41□□□□□ -0.58
SF3B1-211ENST00000487698 CD2BP2O95400 341 aaKnown RBP11.41□□□□□ -0.58
SF3B1-211ENST00000487698 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
SF3B1-211ENST00000487698 CELF1Q92879 486 aaKnown RBP11.41□□□□□ -0.58
SF3B1-211ENST00000487698 TAF5LO75529 589 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 SLC5A1P13866 664 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 MCAMP43121 646 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 DDR1Q08345 913 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 CCDC102BQ68D86 513 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 KIAA1211Q6ZU35 1233 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 ANTXR1Q9H6X2 564 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 MYH13Q9UKX3 1938 aa11.4□□□□□ -0.58
SF3B1-211ENST00000487698 POLRMTO00411 1230 aaKnown RBP11.39□□□□□ -0.59
SF3B1-211ENST00000487698 PHKA1P46020 1223 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 PTH1RQ03431 593 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 HSCBQ8IWL3 235 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 SNAP23O00161 211 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 CHGBP05060 677 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 SERPINB2P05120 415 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 UQCRFS1P1P0C7P4 283 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 RPS8P62241 208 aaKnown RBP11.39□□□□□ -0.59
SF3B1-211ENST00000487698 ERICH6Q7L0X2 663 aa11.39□□□□□ -0.59
SF3B1-211ENST00000487698 ZNF589Q86UQ0 364 aaPredicted RBP11.39□□□□□ -0.59
SF3B1-211ENST00000487698 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms