RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 SART3Q15020 963 aaKnown RBP17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 YEATS4O95619 227 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 CYP2C19P33261 490 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TDO2P48775 406 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ZNF569Q5MCW4 686 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 GBP6Q6ZN66 633 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 STK11IPQ8N1F8 1099 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 CKAP4Q07065 602 aaKnown RBP17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 HSP90AA4PQ58FG1 418 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PLA2G4DQ86XP0 818 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ZBTB9Q96C00 473 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 CLGNO14967 610 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 OTUD6BQ8N6M0 293 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 E9PCH4 1651 aa17.53■□□□□ 0.4
HLA-DQB1-209ENST00000487676 SEC31AO94979 1220 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RABGGTAQ92696 567 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 KIAA0232Q92628 1395 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 SARM1Q6SZW1 724 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 FAM76AQ8TAV0 307 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 WASF1Q92558 559 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 IDI1Q13907 227 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ODF2Q5BJF6 829 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ICE2Q659A1 982 aa17.52■□□□□ 0.4
HLA-DQB1-209ENST00000487676 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.39
HLA-DQB1-209ENST00000487676 STIM1Q13586 685 aa17.52■□□□□ 0.39
HLA-DQB1-209ENST00000487676 PHLPP2Q6ZVD8 1323 aa17.52■□□□□ 0.39
HLA-DQB1-209ENST00000487676 MAP2K2P36507 400 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 TXLNAP40222 546 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 LSG1Q9H089 658 aaKnown RBP17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 TPCN1Q9ULQ1 816 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 NLRP12P59046 1061 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 LAMC1P11047 1609 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 REREQ9P2R6 1566 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 OPA1O60313 960 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ATP10AO60312 1499 aa17.51■□□□□ 0.39
HLA-DQB1-209ENST00000487676 EIF4A2Q14240 407 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 EHBP1Q8NDI1 1231 aa17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 CFAP74Q9C0B2 1584 aa17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ERLIN2O94905 339 aa17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 TULP1O00294 542 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB1-209ENST00000487676 CSB-PGBD3P0DP91 1061 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 MARCKSP29966 332 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 PAFAH1B1P43034 410 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 CTAGE1Q96RT6 745 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 LUC7LQ9NQ29 371 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 KIAA1468Q9P260 1216 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 C11orf57Q6ZUT1 292 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 BRAPQ7Z569 592 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 JAK2O60674 1132 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 INPP5BP32019 993 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 DHX32Q7L7V1 743 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ARID5BQ14865 1188 aa17.49■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ATP6V1AP38606 617 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 SPA17Q15506 151 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 MYO6Q9UM54 1294 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 LONRF2Q1L5Z9 754 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 CCDC144BQ3MJ40 725 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 AKR1B15C9JRZ8 316 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 HSF2BPO75031 334 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 RBM6P78332 1123 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 PTH1RQ03431 593 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 MCMDC2Q4G0Z9 681 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 FCHSD1Q86WN1 690 aa17.48■□□□□ 0.39
HLA-DQB1-209ENST00000487676 CCDC151A5D8V7 595 aa17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 PPP2R2CQ9Y2T4 447 aa17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 N4BP3O15049 544 aa17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 PDE11AQ9HCR9 933 aa17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 MYO1BO43795 1136 aa17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 NUTM2AQ8IVF1 878 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.47■□□□□ 0.39
HLA-DQB1-209ENST00000487676 HSP90AB2PQ58FF8 381 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 B4GALNT4Q76KP1 1039 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 SSH3Q8TE77 659 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms