RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 TXLNAP40222 546 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 MICU3Q86XE3 530 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 ADCY5O95622 1261 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 SERPINC1P01008 464 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 RICTORQ6R327 1708 aa13.77□□□□□ -0.2
TRA2B-214ENST00000487615 CLCN1P35523 988 aa13.77□□□□□ -0.2
TRA2B-214ENST00000487615 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.2
TRA2B-214ENST00000487615 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.2
TRA2B-214ENST00000487615 TMEM67Q5HYA8 995 aa13.77□□□□□ -0.2
TRA2B-214ENST00000487615 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.2
TRA2B-214ENST00000487615 FILIP1Q7Z7B0 1213 aa13.77□□□□□ -0.2
TRA2B-214ENST00000487615 NGLY1Q96IV0 654 aa13.77□□□□□ -0.2
TRA2B-214ENST00000487615 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
TRA2B-214ENST00000487615 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
TRA2B-214ENST00000487615 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
TRA2B-214ENST00000487615 POLA2Q14181 598 aa13.77□□□□□ -0.21
TRA2B-214ENST00000487615 PDILTQ8N807 584 aa13.77□□□□□ -0.21
TRA2B-214ENST00000487615 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
TRA2B-214ENST00000487615 ZNF594Q96JF6 807 aaPredicted RBP13.77□□□□□ -0.21
TRA2B-214ENST00000487615 ZNF165P49910 485 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 IQCA1Q86XH1 822 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 CCDC82Q8N4S0 544 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 MAP7D2Q96T17 732 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 DACH1Q9UI36 760 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
TRA2B-214ENST00000487615 ZNF445P59923 1031 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
TRA2B-214ENST00000487615 COPRSQ9NQ92 184 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 DACT1Q9NYF0 836 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 NDUFB9Q9Y6M9 179 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
TRA2B-214ENST00000487615 CAVIN2O95810 425 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
TRA2B-214ENST00000487615 APOBRQ0VD83 1088 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 PKP1Q13835 747 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 MFSD6Q6ZSS7 791 aa13.76□□□□□ -0.21
TRA2B-214ENST00000487615 CCAR1Q8IX12 1150 aaKnown RBP13.76□□□□□ -0.21
TRA2B-214ENST00000487615 SMTNL1A8MU46 457 aa13.75□□□□□ -0.21
TRA2B-214ENST00000487615 PRC1O43663 620 aa13.75□□□□□ -0.21
TRA2B-214ENST00000487615 PTH1RQ03431 593 aa13.75□□□□□ -0.21
TRA2B-214ENST00000487615 SSRP1Q08945 709 aaKnown RBP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 CEP131Q9UPN4 1083 aa13.75□□□□□ -0.21
TRA2B-214ENST00000487615 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 SMARCC1Q92922 1105 aaPredicted RBP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
TRA2B-214ENST00000487615 RGS12O14924 1447 aa13.75□□□□□ -0.21
TRA2B-214ENST00000487615 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 PCMTD1Q96MG8 357 aaPredicted RBP13.74□□□□□ -0.21
TRA2B-214ENST00000487615 A0A0D9SFI3 127 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 TTLL7Q6ZT98 887 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 CCDC144CPQ8IYA2 1237 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
TRA2B-214ENST00000487615 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
TRA2B-214ENST00000487615 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 HELBQ8NG08 1087 aaPredicted RBP13.74□□□□□ -0.21
TRA2B-214ENST00000487615 FILIP1LQ4L180 1135 aa13.74□□□□□ -0.21
TRA2B-214ENST00000487615 UQCRHLA0A096LP55 91 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 ZBTB43O43298 467 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 UQCRHP07919 91 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 ITGA6P23229 1130 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 TCIRG1Q13488 830 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 STX1AQ16623 288 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 NRKQ7Z2Y5 1582 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 CBFA2T2O43439 604 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 DZIP1Q86YF9 867 aaKnown RBP13.73□□□□□ -0.21
TRA2B-214ENST00000487615 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 CTCFLQ8NI51 663 aaPredicted RBP13.73□□□□□ -0.21
TRA2B-214ENST00000487615 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
TRA2B-214ENST00000487615 CCP110O43303 1012 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 CNNM2Q9H8M5 875 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 DIP2AQ14689 1571 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 KRT23Q9C075 422 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 MNS1Q8NEH6 495 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 ANKIB1Q9P2G1 1089 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 USP5P45974 858 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 PI4K2BQ8TCG2 481 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 APPBP2Q92624 585 aa13.72□□□□□ -0.21
TRA2B-214ENST00000487615 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 ALG1Q9BT22 464 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 SLC26A6Q9BXS9 759 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 CLIP2Q9UDT6 1046 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 MTX1Q13505 466 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms