RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CCDC57Q2TAC2 916 aa30.99■■■□□ 2.55
HLA-C-208ENST00000487245 CEP126Q9P2H0 1117 aa30.99■■■□□ 2.55
HLA-C-208ENST00000487245 SPEF2Q9C093 1822 aa30.99■■■□□ 2.55
HLA-C-208ENST00000487245 DDX46Q7L014 1031 aaKnown RBP30.99■■■□□ 2.55
HLA-C-208ENST00000487245 NECAB1Q8N987 351 aa30.99■■■□□ 2.55
HLA-C-208ENST00000487245 FUCA2Q9BTY2 467 aa30.99■■■□□ 2.55
HLA-C-208ENST00000487245 BTG4Q9NY30 223 aa30.99■■■□□ 2.55
HLA-C-208ENST00000487245 ELP1O95163 1332 aa30.98■■■□□ 2.55
HLA-C-208ENST00000487245 TOB2Q14106 344 aaPredicted RBP30.98■■■□□ 2.55
HLA-C-208ENST00000487245 DNAJC10Q8IXB1 793 aa30.98■■■□□ 2.55
HLA-C-208ENST00000487245 ASAP1Q9ULH1 1129 aa30.98■■■□□ 2.55
HLA-C-208ENST00000487245 AKAP2Q9Y2D5 859 aa30.98■■■□□ 2.55
HLA-C-208ENST00000487245 TIMM10P62072 90 aa30.97■■■□□ 2.55
HLA-C-208ENST00000487245 LRRC24Q50LG9 513 aa30.97■■■□□ 2.55
HLA-C-208ENST00000487245 LARP1BQ659C4 914 aaKnown RBP30.97■■■□□ 2.55
HLA-C-208ENST00000487245 NEK1Q96PY6 1258 aa30.97■■■□□ 2.55
HLA-C-208ENST00000487245 COL14A1Q05707 1796 aaKnown RBP30.97■■■□□ 2.55
HLA-C-208ENST00000487245 DISP2A7MBM2 1401 aa30.96■■■□□ 2.55
HLA-C-208ENST00000487245 A0A1B0GUL7 405 aa30.95■■■□□ 2.55
HLA-C-208ENST00000487245 VPS37CA5D8V6 355 aaPredicted RBP30.95■■■□□ 2.55
HLA-C-208ENST00000487245 IFIT1P09914 478 aaKnown RBP30.95■■■□□ 2.55
HLA-C-208ENST00000487245 LRRFIP1Q32MZ4 808 aaKnown RBP30.95■■■□□ 2.55
HLA-C-208ENST00000487245 HSP90AB3PQ58FF7 597 aa30.95■■■□□ 2.55
HLA-C-208ENST00000487245 ZBTB38Q8NAP3 1195 aaPredicted RBP30.95■■■□□ 2.55
HLA-C-208ENST00000487245 DSCC1Q9BVC3 393 aa30.95■■■□□ 2.55
HLA-C-208ENST00000487245 NDUFB9Q9Y6M9 179 aa30.95■■■□□ 2.55
HLA-C-208ENST00000487245 GOLIM4O00461 696 aa30.95■■■□□ 2.54
HLA-C-208ENST00000487245 ZNF594Q96JF6 807 aaPredicted RBP30.95■■■□□ 2.54
HLA-C-208ENST00000487245 MAP3K15Q6ZN16 1313 aa30.94■■■□□ 2.54
HLA-C-208ENST00000487245 HMGB1P09429 215 aaKnown RBP30.94■■■□□ 2.54
HLA-C-208ENST00000487245 KRT85P78386 507 aa30.94■■■□□ 2.54
HLA-C-208ENST00000487245 ZMYM1Q5SVZ6 1142 aa30.94■■■□□ 2.54
HLA-C-208ENST00000487245 LRP6O75581 1613 aa30.94■■■□□ 2.54
HLA-C-208ENST00000487245 CSF1RP07333 972 aa30.93■■■□□ 2.54
HLA-C-208ENST00000487245 GIGYF2Q6Y7W6 1299 aaKnown RBP30.93■■■□□ 2.54
HLA-C-208ENST00000487245 TAF6LQ9Y6J9 622 aa30.93■■■□□ 2.54
HLA-C-208ENST00000487245 ITGB4P16144 1822 aa30.93■■■□□ 2.54
HLA-C-208ENST00000487245 CCDC129Q6ZRS4 1044 aa30.93■■■□□ 2.54
HLA-C-208ENST00000487245 SEC62Q99442 399 aaKnown RBP30.93■■■□□ 2.54
HLA-C-208ENST00000487245 CDHR2Q9BYE9 1310 aa30.92■■■□□ 2.54
HLA-C-208ENST00000487245 COL9A3Q14050 684 aaPredicted RBP30.92■■■□□ 2.54
HLA-C-208ENST00000487245 ZNF330Q9Y3S2 320 aaPredicted RBP30.92■■■□□ 2.54
HLA-C-208ENST00000487245 CCDC158Q5M9N0 1113 aa30.91■■■□□ 2.54
HLA-C-208ENST00000487245 RNF113AO15541 343 aaKnown RBP30.91■■■□□ 2.54
HLA-C-208ENST00000487245 PUS3Q9BZE2 481 aaKnown RBP30.91■■■□□ 2.54
HLA-C-208ENST00000487245 BCL9O00512 1426 aa30.9■■■□□ 2.54
HLA-C-208ENST00000487245 CYP21A2P08686 494 aa30.9■■■□□ 2.54
HLA-C-208ENST00000487245 CCDC9Q9Y3X0 531 aaKnown RBP30.9■■■□□ 2.54
HLA-C-208ENST00000487245 IFIT5Q13325 482 aaKnown RBP30.89■■■□□ 2.54
HLA-C-208ENST00000487245 TAF7LQ5H9L4 462 aa30.89■■■□□ 2.54
HLA-C-208ENST00000487245 CDC37L1Q7L3B6 337 aa30.89■■■□□ 2.54
HLA-C-208ENST00000487245 PTMAP06454 111 aaKnown RBP30.88■■■□□ 2.53
HLA-C-208ENST00000487245 HCLS1P14317 486 aaPredicted RBP30.88■■■□□ 2.53
HLA-C-208ENST00000487245 TTC6Q86TZ1 520 aa30.88■■■□□ 2.53
HLA-C-208ENST00000487245 TCEANC2Q96MN5 208 aa30.88■■■□□ 2.53
HLA-C-208ENST00000487245 ABCC12Q96J65 1359 aa30.88■■■□□ 2.53
HLA-C-208ENST00000487245 EXOC5O00471 708 aa30.87■■■□□ 2.53
HLA-C-208ENST00000487245 GORABQ5T7V8 394 aa30.87■■■□□ 2.53
HLA-C-208ENST00000487245 GTF3C6Q969F1 213 aa30.87■■■□□ 2.53
HLA-C-208ENST00000487245 SCAND2PQ9GZW5 306 aaPredicted RBP30.87■■■□□ 2.53
HLA-C-208ENST00000487245 PLCH1Q4KWH8 1693 aa30.87■■■□□ 2.53
HLA-C-208ENST00000487245 TTC39AQ5SRH9 613 aa30.87■■■□□ 2.53
HLA-C-208ENST00000487245 FAM89AQ96GI7 184 aa30.87■■■□□ 2.53
HLA-C-208ENST00000487245 LAMA4Q16363 1823 aa30.86■■■□□ 2.53
HLA-C-208ENST00000487245 RRP9O43818 475 aaKnown RBP30.86■■■□□ 2.53
HLA-C-208ENST00000487245 KDM4AO75164 1064 aa30.86■■■□□ 2.53
HLA-C-208ENST00000487245 ZFYP08048 801 aaPredicted RBP30.86■■■□□ 2.53
HLA-C-208ENST00000487245 CYP19A1P11511 503 aaPredicted RBP30.86■■■□□ 2.53
HLA-C-208ENST00000487245 Q6ZUG5 572 aa30.85■■■□□ 2.53
HLA-C-208ENST00000487245 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.85■■■□□ 2.53
HLA-C-208ENST00000487245 CHGBP05060 677 aa30.84■■■□□ 2.53
HLA-C-208ENST00000487245 GIMAP6Q6P9H5 292 aa30.84■■■□□ 2.53
HLA-C-208ENST00000487245 DHX32Q7L7V1 743 aaKnown RBP30.84■■■□□ 2.53
HLA-C-208ENST00000487245 NLRP10Q86W26 655 aa30.84■■■□□ 2.53
HLA-C-208ENST00000487245 USP25Q9UHP3 1055 aa30.84■■■□□ 2.53
HLA-C-208ENST00000487245 XAGE2Q96GT9 111 aa30.84■■■□□ 2.53
HLA-C-208ENST00000487245 ADCY5O95622 1261 aa30.83■■■□□ 2.53
HLA-C-208ENST00000487245 COL22A1Q8NFW1 1626 aaPredicted RBP30.83■■■□□ 2.53
HLA-C-208ENST00000487245 CHMP4CQ96CF2 233 aa30.82■■■□□ 2.53
HLA-C-208ENST00000487245 ERVV-1B6SEH8 477 aa30.82■■■□□ 2.52
HLA-C-208ENST00000487245 CCDC192P0DO97 292 aa30.82■■■□□ 2.52
HLA-C-208ENST00000487245 HSPD1P10809 573 aaKnown RBP30.82■■■□□ 2.52
HLA-C-208ENST00000487245 KIAA2012Q0VF49 1180 aa30.82■■■□□ 2.52
HLA-C-208ENST00000487245 LLPHQ9BRT6 129 aaKnown RBP30.82■■■□□ 2.52
HLA-C-208ENST00000487245 MAST3O60307 1309 aa30.81■■■□□ 2.52
HLA-C-208ENST00000487245 CDCA7Q9BWT1 371 aaPredicted RBP30.81■■■□□ 2.52
HLA-C-208ENST00000487245 HSP90B1P14625 803 aaKnown RBP30.8■■■□□ 2.52
HLA-C-208ENST00000487245 FGD1P98174 961 aa30.8■■■□□ 2.52
HLA-C-208ENST00000487245 STK3Q13188 491 aa30.8■■■□□ 2.52
HLA-C-208ENST00000487245 ANKRD36CQ5JPF3 1778 aa30.8■■■□□ 2.52
HLA-C-208ENST00000487245 DTNBO60941 627 aa30.8■■■□□ 2.52
HLA-C-208ENST00000487245 HLFQ16534 295 aa30.8■■■□□ 2.52
HLA-C-208ENST00000487245 CTNNA3Q9UI47 895 aa30.8■■■□□ 2.52
HLA-C-208ENST00000487245 AHDC1Q5TGY3 1603 aaPredicted RBP30.8■■■□□ 2.52
HLA-C-208ENST00000487245 ANKRD18BA2A2Z9 1011 aa30.79■■■□□ 2.52
HLA-C-208ENST00000487245 FKBP4Q02790 459 aaKnown RBP eCLIP30.79■■■□□ 2.52
HLA-C-208ENST00000487245 STOX1Q6ZVD7 989 aa30.79■■■□□ 2.52
HLA-C-208ENST00000487245 FERMT3Q86UX7 667 aa30.79■■■□□ 2.52
HLA-C-208ENST00000487245 TTLL11Q8NHH1 800 aa30.79■■■□□ 2.52
HLA-C-208ENST00000487245 SMARCC2Q8TAQ2 1214 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms