RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ETFBKMTQ8IXQ9 262 aa9.13□□□□□ -0.95
RTFDC1-209ENST00000487211 ATP13A2Q9NQ11 1180 aa9.13□□□□□ -0.95
RTFDC1-209ENST00000487211 BRPF3Q9ULD4 1205 aa9.13□□□□□ -0.95
RTFDC1-209ENST00000487211 HFM1A2PYH4 1435 aa9.13□□□□□ -0.95
RTFDC1-209ENST00000487211 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 ANKRD33BA6NCL7 494 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 NDUFB5O43674 189 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 ERCC3P19447 782 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 MSX1P28360 303 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 NEUROD4Q9HD90 331 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 CCDC87Q9NVE4 849 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 CAMSAP1Q5T5Y3 1602 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 MROH1Q8NDA8 1641 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 NUP155O75694 1391 aa9.12□□□□□ -0.95
RTFDC1-209ENST00000487211 FZD6O60353 706 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 MAN1A2O60476 641 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 ATP4AP20648 1035 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 HIF1AQ16665 826 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 ATCAYQ86WG3 371 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 TREML1Q86YW5 311 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 SUSD3Q96L08 255 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 DACH1Q9UI36 760 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 BCS1LQ9Y276 419 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 KANK1Q14678 1352 aa9.11□□□□□ -0.95
RTFDC1-209ENST00000487211 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 EIF2AK4Q9P2K8 1649 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 ZAP70P43403 619 aa9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 TMC1Q8TDI8 760 aa9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 HSH2DQ96JZ2 352 aa9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 ASB16Q96NS5 453 aa9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 GPAMQ9HCL2 828 aa9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 GPC6Q9Y625 555 aaPredicted RBP9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 ABCC3O15438 1527 aa9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-209ENST00000487211 SETD5Q9C0A6 1442 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 MICAL2O94851 1124 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 ZNF280CQ8ND82 737 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 ZIC5Q96T25 663 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 GAS2L1Q99501 681 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 RBCK1Q9BYM8 510 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 IRX2Q9BZI1 471 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 ANKIB1Q9P2G1 1089 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 LRRC7Q96NW7 1537 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 KDM5DQ9BY66 1539 aa9.09□□□□□ -0.95
RTFDC1-209ENST00000487211 VWDEQ8N2E2 1590 aa9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 SOBPA7XYQ1 873 aa9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 TGFBR3LH3BV60 316 aa9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 GJA3Q9Y6H8 435 aa9.08□□□□□ -0.96
RTFDC1-209ENST00000487211 C3P01024 1663 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 NPATQ14207 1427 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 ARHGAP31Q2M1Z3 1444 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 DEPDC5O75140 1603 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 A0A1W2PNR3 127 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 RBM25P49756 843 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 RGL4Q8IZJ4 473 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 GPR152Q8TDT2 470 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 EDEM1Q92611 657 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 RUBCNLQ9H714 662 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 POLIQ9UNA4 740 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 RAB3GAP2Q9H2M9 1393 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 PZPP20742 1482 aa9.07□□□□□ -0.96
RTFDC1-209ENST00000487211 LMTK2Q8IWU2 1503 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 F11P03951 625 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 YY1P25490 414 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 IDI1Q13907 227 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 IER5Q5VY09 327 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 PGBD3Q8N328 593 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 CITED4Q96RK1 184 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 TNRQ92752 1358 aa9.06□□□□□ -0.96
RTFDC1-209ENST00000487211 FAM135AQ9P2D6 1515 aa9.05□□□□□ -0.96
RTFDC1-209ENST00000487211 MROH2AA6NES4 1674 aa9.05□□□□□ -0.96
RTFDC1-209ENST00000487211 PDGFAP04085 211 aa9.05□□□□□ -0.96
RTFDC1-209ENST00000487211 PCSK2P16519 638 aa9.05□□□□□ -0.96
RTFDC1-209ENST00000487211 IDH3AP50213 366 aa9.05□□□□□ -0.96
RTFDC1-209ENST00000487211 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
RTFDC1-209ENST00000487211 CFAP65Q6ZU64 1925 aaKnown RBP9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 PDE3BQ13370 1112 aa9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 BTLAQ7Z6A9 289 aa9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 BCL2L13Q9BXK5 485 aa9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 CRISPLD1Q9H336 500 aa9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 DMGDHQ9UI17 866 aaKnown RBP9.04□□□□□ -0.96
RTFDC1-209ENST00000487211 CEP152O94986 1710 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms