RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
ATPAF1-205ENST00000487193 Q7L0L9 218 aa16.42■□□□□ 0.22
ATPAF1-205ENST00000487193 PANK3Q9H999 370 aa16.42■□□□□ 0.22
ATPAF1-205ENST00000487193 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
ATPAF1-205ENST00000487193 PTCH2Q9Y6C5 1203 aa16.42■□□□□ 0.22
ATPAF1-205ENST00000487193 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 IGF2BP3O00425 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 VIL1P09327 827 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 INHBEP58166 350 aa16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 SP3Q02447 781 aa16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 STXBP5LQ9Y2K9 1186 aa16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 DUOX1Q9NRD9 1551 aa16.41■□□□□ 0.22
ATPAF1-205ENST00000487193 MANSC4A6NHS7 340 aaPredicted RBP16.4■□□□□ 0.22
ATPAF1-205ENST00000487193 NF2P35240 595 aa16.4■□□□□ 0.22
ATPAF1-205ENST00000487193 CRHR2Q13324 411 aa16.4■□□□□ 0.22
ATPAF1-205ENST00000487193 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
ATPAF1-205ENST00000487193 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATPAF1-205ENST00000487193 ZNF280AP59817 542 aaPredicted RBP16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 GRAPQ13588 217 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 SLC10A5Q5PT55 438 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 ARMC9Q7Z3E5 817 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 SH3TC2Q8TF17 1288 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 POLLQ9UGP5 575 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 NR2E3Q9Y5X4 410 aa16.39■□□□□ 0.21
ATPAF1-205ENST00000487193 A0A1W2PPC1 479 aa16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 HCLS1P14317 486 aaPredicted RBP16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 MYL6BP14649 208 aa16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 SLC10A4Q96EP9 437 aa16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 UTP14AQ9BVJ6 771 aaKnown RBP16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 FZD1Q9UP38 647 aa16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 LAMB2P55268 1798 aa16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
ATPAF1-205ENST00000487193 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 G3V3G9 751 aa16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 DCAF8Q5TAQ9 597 aa16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 HTATIP2Q9BUP3 242 aa16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
ATPAF1-205ENST00000487193 NBPF9Q3BBW0 867 aa16.36■□□□□ 0.21
ATPAF1-205ENST00000487193 ANGEL1Q9UNK9 670 aaKnown RBP16.36■□□□□ 0.21
ATPAF1-205ENST00000487193 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 COL9A1P20849 921 aa16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 GPSM2P81274 684 aa16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 PARP10Q53GL7 1025 aa16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 RSBN1LQ6PCB5 846 aaPredicted RBP16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 EYA3Q99504 573 aa16.35■□□□□ 0.21
ATPAF1-205ENST00000487193 ANKRD36CQ5JPF3 1778 aa16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 LDLRAD1Q5T700 205 aa16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 AGBL3Q8NEM8 1001 aa16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 MTMR10Q9NXD2 777 aa16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 LAMA3Q16787 3333 aa16.34■□□□□ 0.21
ATPAF1-205ENST00000487193 DDX60Q8IY21 1712 aaKnown RBP16.33■□□□□ 0.21
ATPAF1-205ENST00000487193 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.2
ATPAF1-205ENST00000487193 ARHGEF6Q15052 776 aa16.33■□□□□ 0.2
ATPAF1-205ENST00000487193 MCM10Q7L590 875 aa16.33■□□□□ 0.2
ATPAF1-205ENST00000487193 TMC4Q7Z404 712 aa16.33■□□□□ 0.2
ATPAF1-205ENST00000487193 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
ATPAF1-205ENST00000487193 MTFR1Q15390 333 aa16.32■□□□□ 0.2
ATPAF1-205ENST00000487193 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
ATPAF1-205ENST00000487193 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
ATPAF1-205ENST00000487193 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
ATPAF1-205ENST00000487193 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
ATPAF1-205ENST00000487193 TBC1D16Q8TBP0 767 aa16.31■□□□□ 0.2
ATPAF1-205ENST00000487193 CLMNQ96JQ2 1002 aa16.31■□□□□ 0.2
ATPAF1-205ENST00000487193 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
ATPAF1-205ENST00000487193 ZBTB48P10074 688 aaPredicted RBP16.3■□□□□ 0.2
ATPAF1-205ENST00000487193 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
ATPAF1-205ENST00000487193 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
ATPAF1-205ENST00000487193 PTPN18Q99952 460 aa16.3■□□□□ 0.2
ATPAF1-205ENST00000487193 LRRC37AA6NMS7 1700 aa16.3■□□□□ 0.2
ATPAF1-205ENST00000487193 EVI5O60447 810 aa16.29■□□□□ 0.2
ATPAF1-205ENST00000487193 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
ATPAF1-205ENST00000487193 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
ATPAF1-205ENST00000487193 GMLQ99445 158 aa16.29■□□□□ 0.2
ATPAF1-205ENST00000487193 VCANP13611 3396 aa16.28■□□□□ 0.2
ATPAF1-205ENST00000487193 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
ATPAF1-205ENST00000487193 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
ATPAF1-205ENST00000487193 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
ATPAF1-205ENST00000487193 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
ATPAF1-205ENST00000487193 UBE2Q1Q7Z7E8 422 aa16.27■□□□□ 0.2
ATPAF1-205ENST00000487193 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
ATPAF1-205ENST00000487193 LAMB4A4D0S4 1761 aa16.27■□□□□ 0.2
ATPAF1-205ENST00000487193 WNT10BO00744 389 aa16.26■□□□□ 0.19
ATPAF1-205ENST00000487193 NKX2-3Q8TAU0 364 aa16.26■□□□□ 0.19
ATPAF1-205ENST00000487193 ARHGAP39Q9C0H5 1083 aa16.26■□□□□ 0.19
ATPAF1-205ENST00000487193 ZSWIM8A7E2V4 1837 aa16.25■□□□□ 0.19
ATPAF1-205ENST00000487193 SASH1O94885 1247 aa16.25■□□□□ 0.19
ATPAF1-205ENST00000487193 GJA5P36382 358 aa16.25■□□□□ 0.19
ATPAF1-205ENST00000487193 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms