RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
PRKCB-207ENST00000486868 USPL1Q5W0Q7 1092 aa14.04□□□□□ -0.16
PRKCB-207ENST00000486868 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
PRKCB-207ENST00000486868 PAG1Q9NWQ8 432 aa14.04□□□□□ -0.16
PRKCB-207ENST00000486868 MED23Q9ULK4 1368 aa14.04□□□□□ -0.16
PRKCB-207ENST00000486868 ZFYP08048 801 aaPredicted RBP14.03□□□□□ -0.16
PRKCB-207ENST00000486868 UQCRFS1P1P0C7P4 283 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 RFC4P35249 363 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 TBC1D9BQ66K14 1250 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 MPHOSPH8Q99549 860 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 IL25Q9H293 177 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 HELLSQ9NRZ9 838 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 LRRC4BQ9NT99 713 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 SPEF2Q9C093 1822 aa14.03□□□□□ -0.16
PRKCB-207ENST00000486868 CCDC171Q6TFL3 1326 aa14.02□□□□□ -0.17
PRKCB-207ENST00000486868 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
PRKCB-207ENST00000486868 TSGA10IPQ3SY00 556 aa14.02□□□□□ -0.17
PRKCB-207ENST00000486868 TTC39AQ5SRH9 613 aa14.02□□□□□ -0.17
PRKCB-207ENST00000486868 GORABQ5T7V8 394 aa14.02□□□□□ -0.17
PRKCB-207ENST00000486868 LAMB2P55268 1798 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 SLC5A1P13866 664 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-207ENST00000486868 DDIT3P35638 169 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 KCNQ4P56696 695 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 NECTIN1Q15223 517 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 TTF1Q15361 905 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-207ENST00000486868 ERFEQ4G0M1 354 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 MCMDC2Q4G0Z9 681 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 CCDC85AQ96PX6 553 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-207ENST00000486868 BSDC1Q9NW68 430 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-207ENST00000486868 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 HMG20BQ9P0W2 317 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 MYH3P11055 1940 aa14.01□□□□□ -0.17
PRKCB-207ENST00000486868 CARMIL3Q8ND23 1372 aa14□□□□□ -0.17
PRKCB-207ENST00000486868 RXRBP28702 533 aa14□□□□□ -0.17
PRKCB-207ENST00000486868 ZMYM1Q5SVZ6 1142 aa14□□□□□ -0.17
PRKCB-207ENST00000486868 RNF20Q5VTR2 975 aa14□□□□□ -0.17
PRKCB-207ENST00000486868 NBPF5PQ86XG9 351 aaPredicted RBP14□□□□□ -0.17
PRKCB-207ENST00000486868 ANKRD18AQ8IVF6 992 aa14□□□□□ -0.17
PRKCB-207ENST00000486868 FAM227BQ96M60 508 aa14□□□□□ -0.17
PRKCB-207ENST00000486868 DNAJC2Q99543 621 aaKnown RBP14□□□□□ -0.17
PRKCB-207ENST00000486868 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
PRKCB-207ENST00000486868 TAF1LQ8IZX4 1826 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
PRKCB-207ENST00000486868 TAF5LO75529 589 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 TRIM37O94972 964 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-207ENST00000486868 GTF2E1P29083 439 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-207ENST00000486868 ADORA1P30542 326 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 UBE4AQ14139 1066 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 ZSCAN25Q6NSZ9 544 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 CWC22Q9HCG8 908 aaKnown RBP13.99□□□□□ -0.17
PRKCB-207ENST00000486868 SEC31BQ9NQW1 1179 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 SNX14Q9Y5W7 946 aa13.99□□□□□ -0.17
PRKCB-207ENST00000486868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.98□□□□□ -0.17
PRKCB-207ENST00000486868 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 GOLIM4O00461 696 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 IGSF3O75054 1194 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 PTH1RQ03431 593 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 FLAD1Q8NFF5 587 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
PRKCB-207ENST00000486868 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
PRKCB-207ENST00000486868 AK9Q5TCS8 1911 aa13.98□□□□□ -0.17
PRKCB-207ENST00000486868 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
PRKCB-207ENST00000486868 PSMA5P28066 241 aa13.97□□□□□ -0.17
PRKCB-207ENST00000486868 NEK4P51957 841 aa13.97□□□□□ -0.17
PRKCB-207ENST00000486868 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
PRKCB-207ENST00000486868 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
PRKCB-207ENST00000486868 EDC3Q96F86 508 aaKnown RBP13.97□□□□□ -0.17
PRKCB-207ENST00000486868 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.97□□□□□ -0.172e-7■■■□□ 18.6
PRKCB-207ENST00000486868 ALDH8A1Q9H2A2 487 aaPredicted RBP13.97□□□□□ -0.17
PRKCB-207ENST00000486868 RBM8AQ9Y5S9 174 aaKnown RBP13.97□□□□□ -0.17
PRKCB-207ENST00000486868 TM4SF1P30408 202 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.17
PRKCB-207ENST00000486868 CHRNDQ07001 517 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 CUL4AQ13619 759 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 KRT32Q14532 448 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 NFIXQ14938 502 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.17
PRKCB-207ENST00000486868 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 PROM2Q8N271 834 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
PRKCB-207ENST00000486868 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
PRKCB-207ENST00000486868 GYS1P13807 737 aa13.95□□□□□ -0.18
PRKCB-207ENST00000486868 UBE3CQ15386 1083 aa13.95□□□□□ -0.18
PRKCB-207ENST00000486868 BICDL1Q6ZP65 573 aa13.95□□□□□ -0.18
PRKCB-207ENST00000486868 ZNF589Q86UQ0 364 aaPredicted RBP13.95□□□□□ -0.18
PRKCB-207ENST00000486868 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
PRKCB-207ENST00000486868 APPBP2Q92624 585 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms