RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
XRN1-212ENST00000486211 HDAC9Q9UKV0 1011 aa11.26□□□□□ -0.61
XRN1-212ENST00000486211 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
XRN1-212ENST00000486211 ADM5C9JUS6 153 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
XRN1-212ENST00000486211 KCNQ3O43525 872 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 HMOX1P09601 288 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 HLFQ16534 295 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
XRN1-212ENST00000486211 ARSIQ5FYB1 569 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 KRT26Q7Z3Y9 468 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 RASAL3Q86YV0 1011 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 ZNF687Q8N1G0 1237 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 CRAMP1Q96RY5 1269 aa11.25□□□□□ -0.61
XRN1-212ENST00000486211 RTFDC1Q9BY42 306 aaPredicted RBP11.25□□□□□ -0.61
XRN1-212ENST00000486211 RBBP6Q7Z6E9 1792 aaKnown RBP11.24□□□□□ -0.61
XRN1-212ENST00000486211 PRAMEF22A3QJZ6 481 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 RAD17O75943 681 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 EGFRP00533 1210 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
XRN1-212ENST00000486211 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
XRN1-212ENST00000486211 BCL2L13Q9BXK5 485 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 HTTP42858 3142 aa11.24□□□□□ -0.61
XRN1-212ENST00000486211 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
XRN1-212ENST00000486211 POLR2AP24928 1970 aaKnown RBP11.23□□□□□ -0.61
XRN1-212ENST00000486211 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
XRN1-212ENST00000486211 GPR25O00155 361 aa11.23□□□□□ -0.61
XRN1-212ENST00000486211 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
XRN1-212ENST00000486211 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
XRN1-212ENST00000486211 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
XRN1-212ENST00000486211 H7C1D1 291 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 TEFQ10587 303 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 TNIP1Q15025 636 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 SLC17A8Q8NDX2 589 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 CEMIPQ8WUJ3 1361 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
XRN1-212ENST00000486211 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.61
XRN1-212ENST00000486211 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.61
XRN1-212ENST00000486211 DPF2Q92785 391 aa11.21□□□□□ -0.61
XRN1-212ENST00000486211 RBM17Q96I25 401 aaKnown RBP11.21□□□□□ -0.61
XRN1-212ENST00000486211 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
XRN1-212ENST00000486211 TBC1D10BQ4KMP7 808 aaPredicted RBP11.2□□□□□ -0.62
XRN1-212ENST00000486211 MORC1Q86VD1 984 aa11.2□□□□□ -0.62
XRN1-212ENST00000486211 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
XRN1-212ENST00000486211 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
XRN1-212ENST00000486211 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
XRN1-212ENST00000486211 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
XRN1-212ENST00000486211 BRCA2P51587 3418 aa11.19□□□□□ -0.62
XRN1-212ENST00000486211 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
XRN1-212ENST00000486211 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.627e-13■■■■■ 45.1
XRN1-212ENST00000486211 DCPSQ96C86 337 aaKnown RBP11.19□□□□□ -0.62
XRN1-212ENST00000486211 CDCA5Q96FF9 252 aa11.19□□□□□ -0.62
XRN1-212ENST00000486211 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
XRN1-212ENST00000486211 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
XRN1-212ENST00000486211 ASTN2O75129 1339 aaPredicted RBP11.18□□□□□ -0.62
XRN1-212ENST00000486211 C2orf72A6NCS6 295 aa11.18□□□□□ -0.62
XRN1-212ENST00000486211 GNAT3A8MTJ3 354 aa11.18□□□□□ -0.62
XRN1-212ENST00000486211 FKTNO75072 461 aa11.18□□□□□ -0.62
XRN1-212ENST00000486211 EN2P19622 333 aaPredicted RBP11.18□□□□□ -0.62
XRN1-212ENST00000486211 TM4SF4P48230 202 aa11.18□□□□□ -0.62
XRN1-212ENST00000486211 KIAA0100Q14667 2235 aaKnown RBP11.18□□□□□ -0.62
XRN1-212ENST00000486211 NUP98P52948 1817 aa11.18□□□□□ -0.62
XRN1-212ENST00000486211 ABCC4O15439 1325 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 ZNF316A6NFI3 1004 aaPredicted RBP11.17□□□□□ -0.62
XRN1-212ENST00000486211 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 PSMD14O00487 310 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 NTSR2O95665 410 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
XRN1-212ENST00000486211 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 DPP8Q6V1X1 898 aaPredicted RBP11.17□□□□□ -0.62
XRN1-212ENST00000486211 PANK3Q9H999 370 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 GGA3Q9NZ52 723 aa11.17□□□□□ -0.62
XRN1-212ENST00000486211 ERVV-1B6SEH8 477 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 FKBP1BP68106 108 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
XRN1-212ENST00000486211 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 SP8Q8IXZ3 490 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 MPNDQ8N594 471 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
XRN1-212ENST00000486211 CENPFP49454 3210 aa11.16□□□□□ -0.62
XRN1-212ENST00000486211 H0YGN5 161 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 GPTP24298 496 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 KIF4BQ2VIQ3 1234 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 ARMC5Q96C12 935 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 A0A0C4DFX4 3053 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 COL6A3P12111 3177 aa11.15□□□□□ -0.62
XRN1-212ENST00000486211 RTL9Q8NET4 1388 aa11.15□□□□□ -0.63
XRN1-212ENST00000486211 MAP3K15Q6ZN16 1313 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
XRN1-212ENST00000486211 ZNF34Q8IZ26 560 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
XRN1-212ENST00000486211 TMX4Q9H1E5 349 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms