RNA–Protein interactions for RNA: ENST00000485743.1

HBB-204, Transcript of hemoglobin subunit beta, humanhuman

TSL 1 (best)

Gene HBB, Length 680 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-204ENST00000485743 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
HBB-204ENST00000485743 SCAF8Q9UPN6 1271 aaKnown RBP17.75■□□□□ 0.43
HBB-204ENST00000485743 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
HBB-204ENST00000485743 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
HBB-204ENST00000485743 PRAMEF18Q5VWM3 479 aa17.74■□□□□ 0.43
HBB-204ENST00000485743 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
HBB-204ENST00000485743 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
HBB-204ENST00000485743 POLLQ9UGP5 575 aa17.74■□□□□ 0.43
HBB-204ENST00000485743 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
HBB-204ENST00000485743 PITPNM2Q9BZ72 1349 aa17.73■□□□□ 0.43
HBB-204ENST00000485743 ALDH1A1P00352 501 aa17.73■□□□□ 0.43
HBB-204ENST00000485743 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
HBB-204ENST00000485743 KDM3BQ7LBC6 1761 aa17.72■□□□□ 0.43
HBB-204ENST00000485743 C6orf229H3BNL8 230 aa17.72■□□□□ 0.43
HBB-204ENST00000485743 TTLL12Q14166 644 aaPredicted RBP17.72■□□□□ 0.43
HBB-204ENST00000485743 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
HBB-204ENST00000485743 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
HBB-204ENST00000485743 PSME4Q14997 1843 aa17.72■□□□□ 0.43
HBB-204ENST00000485743 ZNF609O15014 1411 aa17.72■□□□□ 0.43
HBB-204ENST00000485743 TMEM106CQ9BVX2 250 aa17.71■□□□□ 0.43
HBB-204ENST00000485743 MNX1P50219 401 aaPredicted RBP17.7■□□□□ 0.42
HBB-204ENST00000485743 GPSM2P81274 684 aa17.7■□□□□ 0.42
HBB-204ENST00000485743 PTPN12Q05209 780 aaKnown RBP17.7■□□□□ 0.42
HBB-204ENST00000485743 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
HBB-204ENST00000485743 MYOZ2Q9NPC6 264 aa17.7■□□□□ 0.42
HBB-204ENST00000485743 LAMB1P07942 1786 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 COL4A1P02462 1669 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
HBB-204ENST00000485743 TCIRG1Q13488 830 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 SPRYD7Q5W111 196 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 ZNF333Q96JL9 665 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 EYA3Q99504 573 aa17.69■□□□□ 0.42
HBB-204ENST00000485743 RSBN1LQ6PCB5 846 aaPredicted RBP17.68■□□□□ 0.42
HBB-204ENST00000485743 IFNL1Q8IU54 200 aa17.68■□□□□ 0.42
HBB-204ENST00000485743 LAMA3Q16787 3333 aa17.68■□□□□ 0.42
HBB-204ENST00000485743 CAP1Q01518 475 aa17.67■□□□□ 0.42
HBB-204ENST00000485743 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
HBB-204ENST00000485743 NLRP10Q86W26 655 aa17.67■□□□□ 0.42
HBB-204ENST00000485743 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
HBB-204ENST00000485743 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
HBB-204ENST00000485743 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
HBB-204ENST00000485743 GMLQ99445 158 aa17.67■□□□□ 0.42
HBB-204ENST00000485743 EFCC1Q9HA90 598 aa17.67■□□□□ 0.42
HBB-204ENST00000485743 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
HBB-204ENST00000485743 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
HBB-204ENST00000485743 INHBEP58166 350 aa17.66■□□□□ 0.42
HBB-204ENST00000485743 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
HBB-204ENST00000485743 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
HBB-204ENST00000485743 LRP10Q7Z4F1 713 aa17.66■□□□□ 0.42
HBB-204ENST00000485743 MANSC4A6NHS7 340 aaPredicted RBP17.65■□□□□ 0.42
HBB-204ENST00000485743 IGF2BP3O00425 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
HBB-204ENST00000485743 NF2P35240 595 aa17.65■□□□□ 0.42
HBB-204ENST00000485743 NBPF9Q3BBW0 867 aa17.65■□□□□ 0.42
HBB-204ENST00000485743 LDLRAD1Q5T700 205 aa17.65■□□□□ 0.42
HBB-204ENST00000485743 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
HBB-204ENST00000485743 ZC3H12CQ9C0D7 883 aaKnown RBP17.65■□□□□ 0.42
HBB-204ENST00000485743 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
HBB-204ENST00000485743 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
HBB-204ENST00000485743 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
HBB-204ENST00000485743 UNC80Q8N2C7 3258 aa17.65■□□□□ 0.42
HBB-204ENST00000485743 PRKG1Q13976 671 aa17.64■□□□□ 0.41
HBB-204ENST00000485743 ARMC9Q7Z3E5 817 aa17.64■□□□□ 0.41
HBB-204ENST00000485743 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
HBB-204ENST00000485743 PER1O15534 1290 aaPredicted RBP17.63■□□□□ 0.41
HBB-204ENST00000485743 SLC4A8Q2Y0W8 1093 aa17.63■□□□□ 0.41
HBB-204ENST00000485743 G3V3G9 751 aa17.62■□□□□ 0.41
HBB-204ENST00000485743 CRHR2Q13324 411 aa17.62■□□□□ 0.41
HBB-204ENST00000485743 PDIA6Q15084 440 aa17.62■□□□□ 0.41
HBB-204ENST00000485743 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
HBB-204ENST00000485743 SP3Q02447 781 aa17.61■□□□□ 0.41
HBB-204ENST00000485743 SLC9C1Q4G0N8 1177 aa17.61■□□□□ 0.41
HBB-204ENST00000485743 NBPF11Q86T75 865 aa17.61■□□□□ 0.41
HBB-204ENST00000485743 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
HBB-204ENST00000485743 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
HBB-204ENST00000485743 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
HBB-204ENST00000485743 SF3B3Q15393 1217 aaKnown RBP17.6■□□□□ 0.41
HBB-204ENST00000485743 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
HBB-204ENST00000485743 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
HBB-204ENST00000485743 ANGEL1Q9UNK9 670 aaKnown RBP17.6■□□□□ 0.41
HBB-204ENST00000485743 PTCH2Q9Y6C5 1203 aa17.6■□□□□ 0.41
HBB-204ENST00000485743 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
HBB-204ENST00000485743 SOX1O00570 391 aaPredicted RBP17.59■□□□□ 0.41
HBB-204ENST00000485743 WNT10BO00744 389 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 MYCP01106 439 aaPredicted RBP17.59■□□□□ 0.41
HBB-204ENST00000485743 PROSER3Q2NL68 480 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 DPF3Q92784 378 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 FZD1Q9UP38 647 aa17.59■□□□□ 0.41
HBB-204ENST00000485743 ZNF646O15015 1829 aaPredicted RBP17.58■□□□□ 0.41
HBB-204ENST00000485743 UFL1O94874 794 aa17.58■□□□□ 0.4
HBB-204ENST00000485743 ANXA1P04083 346 aa17.58■□□□□ 0.4
HBB-204ENST00000485743 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
HBB-204ENST00000485743 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
HBB-204ENST00000485743 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
HBB-204ENST00000485743 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
HBB-204ENST00000485743 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms