RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 IFT43Q96FT9 208 aa7.86□□□□□ -1.15
SPTA1-207ENST00000485680 HSH2DQ96JZ2 352 aa7.86□□□□□ -1.15
SPTA1-207ENST00000485680 ZCCHC6Q5VYS8 1495 aaKnown RBP7.86□□□□□ -1.15
SPTA1-207ENST00000485680 BRD2P25440 801 aaKnown RBP7.85□□□□□ -1.15
SPTA1-207ENST00000485680 MAPK1P28482 360 aa7.85□□□□□ -1.15
SPTA1-207ENST00000485680 FMR1NBQ8N0W7 255 aaPredicted RBP7.85□□□□□ -1.15
SPTA1-207ENST00000485680 ZNF280CQ8ND82 737 aa7.85□□□□□ -1.15
SPTA1-207ENST00000485680 BRD7Q9NPI1 651 aa7.85□□□□□ -1.15
SPTA1-207ENST00000485680 CCDC87Q9NVE4 849 aa7.85□□□□□ -1.15
SPTA1-207ENST00000485680 FZD6O60353 706 aa7.84□□□□□ -1.15
SPTA1-207ENST00000485680 DCTN4Q9UJW0 460 aa7.84□□□□□ -1.15
SPTA1-207ENST00000485680 USP21Q9UK80 565 aa7.84□□□□□ -1.15
SPTA1-207ENST00000485680 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
SPTA1-207ENST00000485680 AFF1P51825 1210 aaKnown RBP7.83□□□□□ -1.16
SPTA1-207ENST00000485680 AAMPQ13685 434 aa7.83□□□□□ -1.16
SPTA1-207ENST00000485680 TREML1Q86YW5 311 aa7.83□□□□□ -1.16
SPTA1-207ENST00000485680 ABTB2Q8N961 1025 aa7.83□□□□□ -1.16
SPTA1-207ENST00000485680 NUDT8Q8WV74 236 aa7.83□□□□□ -1.16
SPTA1-207ENST00000485680 SUSD3Q96L08 255 aa7.83□□□□□ -1.16
SPTA1-207ENST00000485680 CEP63Q96MT8 703 aa7.83□□□□□ -1.16
SPTA1-207ENST00000485680 JPH1Q9HDC5 661 aaPredicted RBP7.83□□□□□ -1.16
SPTA1-207ENST00000485680 DMRTC2Q8IXT2 367 aaPredicted RBP7.82□□□□□ -1.16
SPTA1-207ENST00000485680 WFDC12Q8WWY7 111 aa7.82□□□□□ -1.16
SPTA1-207ENST00000485680 BHMTQ93088 406 aa7.82□□□□□ -1.16
SPTA1-207ENST00000485680 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
SPTA1-207ENST00000485680 FMNL2Q96PY5 1086 aa7.82□□□□□ -1.16
SPTA1-207ENST00000485680 SLC6A14Q9UN76 642 aa7.82□□□□□ -1.16
SPTA1-207ENST00000485680 ANKRD33BA6NCL7 494 aa7.81□□□□□ -1.16
SPTA1-207ENST00000485680 PAX4O43316 350 aa7.81□□□□□ -1.16
SPTA1-207ENST00000485680 TXKP42681 527 aa7.81□□□□□ -1.16
SPTA1-207ENST00000485680 ZAP70P43403 619 aa7.81□□□□□ -1.16
SPTA1-207ENST00000485680 ALKBH2Q6NS38 261 aa7.81□□□□□ -1.16
SPTA1-207ENST00000485680 UBE2OQ9C0C9 1292 aaKnown RBP7.81□□□□□ -1.16
SPTA1-207ENST00000485680 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
SPTA1-207ENST00000485680 TGFBR3LH3BV60 316 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 NDUFB5O43674 189 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 MICAL2O94851 1124 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
SPTA1-207ENST00000485680 TYRO3Q06418 890 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 EDEM1Q92611 657 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
SPTA1-207ENST00000485680 DMGDHQ9UI17 866 aaKnown RBP7.8□□□□□ -1.16
SPTA1-207ENST00000485680 IREB2P48200 963 aaKnown RBP7.79□□□□□ -1.16
SPTA1-207ENST00000485680 TBC1D8BQ0IIM8 1120 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 LCE1DQ5T752 114 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 NPAS4Q8IUM7 802 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 GPR152Q8TDT2 470 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 ASB16Q96NS5 453 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 IGFLR1Q9H665 355 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 PCMTD2Q9NV79 361 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 POLIQ9UNA4 740 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 USP20Q9Y2K6 914 aa7.79□□□□□ -1.16
SPTA1-207ENST00000485680 OPLAHO14841 1288 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 PDGFAP04085 211 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 NOS3P29474 1203 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 IDH3AP50213 366 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 PSAPL1Q6NUJ1 521 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 TMC7Q7Z402 723 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 BTLAQ7Z6A9 289 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 NPM2Q86SE8 214 aaKnown RBP7.78□□□□□ -1.16
SPTA1-207ENST00000485680 RBCK1Q9BYM8 510 aa7.78□□□□□ -1.16
SPTA1-207ENST00000485680 COBLO75128 1261 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 YBX3P16989 372 aaKnown RBP eCLIP7.77□□□□□ -1.17
SPTA1-207ENST00000485680 HIF1AQ16665 826 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 IER5Q5VY09 327 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 PRR23CQ6ZRP0 262 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 FBXO11Q86XK2 927 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 ZSCAN29Q8IWY8 852 aaPredicted RBP7.77□□□□□ -1.17
SPTA1-207ENST00000485680 RGL4Q8IZJ4 473 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 TMC1Q8TDI8 760 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 DNAJB12Q9NXW2 375 aaKnown RBP7.77□□□□□ -1.17
SPTA1-207ENST00000485680 NAGPAQ9UK23 515 aa7.77□□□□□ -1.17
SPTA1-207ENST00000485680 RGS9O75916 674 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-207ENST00000485680 MZF1P28698 734 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-207ENST00000485680 MSL1Q68DK7 614 aa7.76□□□□□ -1.17
SPTA1-207ENST00000485680 SLC51AQ86UW1 340 aa7.76□□□□□ -1.17
SPTA1-207ENST00000485680 DTWD1Q8N5C7 304 aa7.76□□□□□ -1.17
SPTA1-207ENST00000485680 NUDT16Q96DE0 195 aaKnown RBP7.76□□□□□ -1.17
SPTA1-207ENST00000485680 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
SPTA1-207ENST00000485680 EFCC1Q9HA90 598 aa7.76□□□□□ -1.17
SPTA1-207ENST00000485680 DCAF1Q9Y4B6 1507 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 A6NHS1 94 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 GPR182O15218 404 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 IGHA2P01877 340 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 ERCC3P19447 782 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 GRNP28799 593 aaKnown RBP7.75□□□□□ -1.17
SPTA1-207ENST00000485680 INPP5BP32019 993 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 RBM25P49756 843 aaKnown RBP7.75□□□□□ -1.17
SPTA1-207ENST00000485680 GJD3Q8N144 294 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 GGNBP2Q9H3C7 697 aa7.75□□□□□ -1.17
SPTA1-207ENST00000485680 ARID1BQ8NFD5 2236 aaPredicted RBP7.74□□□□□ -1.17
SPTA1-207ENST00000485680 SSTR4P31391 388 aa7.74□□□□□ -1.17
SPTA1-207ENST00000485680 ARSDP51689 593 aa7.74□□□□□ -1.17
SPTA1-207ENST00000485680 TAGLNQ01995 201 aaKnown RBP7.74□□□□□ -1.17
SPTA1-207ENST00000485680 GRIK5Q16478 980 aa7.74□□□□□ -1.17
SPTA1-207ENST00000485680 FAM129BQ96TA1 746 aa7.74□□□□□ -1.17
SPTA1-207ENST00000485680 GSX2Q9BZM3 304 aa7.74□□□□□ -1.17
SPTA1-207ENST00000485680 RTCBQ9Y3I0 505 aaKnown RBP7.74□□□□□ -1.17
SPTA1-207ENST00000485680 TREHO43280 583 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms