RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 ITPK1Q13572 414 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 MTMR2Q13614 643 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 ARID5BQ14865 1188 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 GPR162Q16538 588 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 AEBP1Q8IUX7 1158 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
CLRN1-206ENST00000485607 TMOD3Q9NYL9 352 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 YBX3P16989 372 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLRN1-206ENST00000485607 IFNL2Q8IZJ0 200 aa10.15□□□□□ -0.78
CLRN1-206ENST00000485607 AK7Q96M32 723 aa10.15□□□□□ -0.78
CLRN1-206ENST00000485607 ATG3Q9NT62 314 aa10.15□□□□□ -0.78
CLRN1-206ENST00000485607 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.79
CLRN1-206ENST00000485607 KDRP35968 1356 aa10.14□□□□□ -0.79
CLRN1-206ENST00000485607 ADH1CP00326 375 aa10.14□□□□□ -0.79
CLRN1-206ENST00000485607 MORC1Q86VD1 984 aa10.14□□□□□ -0.79
CLRN1-206ENST00000485607 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
CLRN1-206ENST00000485607 SLC4A9Q96Q91 983 aa10.14□□□□□ -0.79
CLRN1-206ENST00000485607 KIF7Q2M1P5 1343 aa10.13□□□□□ -0.79
CLRN1-206ENST00000485607 UBR3Q6ZT12 1888 aa10.13□□□□□ -0.79
CLRN1-206ENST00000485607 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
CLRN1-206ENST00000485607 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
CLRN1-206ENST00000485607 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
CLRN1-206ENST00000485607 PLEKHG2Q9H7P9 1386 aa10.13□□□□□ -0.79
CLRN1-206ENST00000485607 TIMP2P16035 220 aa10.12□□□□□ -0.79
CLRN1-206ENST00000485607 ZNF530Q6P9A1 599 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-206ENST00000485607 LORP23490 312 aaPredicted RBP10.11□□□□□ -0.79
CLRN1-206ENST00000485607 SSFA2P28290 1259 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 IL13P35225 146 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 AGERQ15109 404 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
CLRN1-206ENST00000485607 MPNDQ8N594 471 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 DCAF5Q96JK2 942 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 CD2APQ9Y5K6 639 aa10.11□□□□□ -0.79
CLRN1-206ENST00000485607 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
CLRN1-206ENST00000485607 MAN1A2O60476 641 aa10.1□□□□□ -0.79
CLRN1-206ENST00000485607 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
CLRN1-206ENST00000485607 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
CLRN1-206ENST00000485607 SULT6B1Q6IMI4 303 aa10.1□□□□□ -0.79
CLRN1-206ENST00000485607 CHD4Q14839 1912 aa10.09□□□□□ -0.79
CLRN1-206ENST00000485607 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
CLRN1-206ENST00000485607 ZIC2O95409 532 aaPredicted RBP10.08□□□□□ -0.8
CLRN1-206ENST00000485607 HSP90AB1P08238 724 aaKnown RBP10.08□□□□□ -0.8
CLRN1-206ENST00000485607 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
CLRN1-206ENST00000485607 MTHFSP49914 203 aa10.08□□□□□ -0.8
CLRN1-206ENST00000485607 CABP4P57796 275 aa10.08□□□□□ -0.8
CLRN1-206ENST00000485607 AMOTQ4VCS5 1084 aa10.08□□□□□ -0.8
CLRN1-206ENST00000485607 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-206ENST00000485607 ZNF831Q5JPB2 1677 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-206ENST00000485607 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
CLRN1-206ENST00000485607 MMP10P09238 476 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 HMOX1P09601 288 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 C1orf141Q5JVX7 400 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 CC2D1BQ5T0F9 858 aaKnown RBP10.07□□□□□ -0.8
CLRN1-206ENST00000485607 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 NFATC2IPQ8NCF5 419 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 FOXJ1Q92949 421 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
CLRN1-206ENST00000485607 PXDNLA1KZ92 1463 aa10.06□□□□□ -0.8
CLRN1-206ENST00000485607 UPP2O95045 317 aa10.06□□□□□ -0.8
CLRN1-206ENST00000485607 C1QTNF8P60827 252 aa10.06□□□□□ -0.8
CLRN1-206ENST00000485607 GIGYF2Q6Y7W6 1299 aaKnown RBP10.06□□□□□ -0.8
CLRN1-206ENST00000485607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLRN1-206ENST00000485607 ZFAND3Q9H8U3 227 aa10.06□□□□□ -0.8
CLRN1-206ENST00000485607 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
CLRN1-206ENST00000485607 CICQ96RK0 1608 aaPredicted RBP10.06□□□□□ -0.8
CLRN1-206ENST00000485607 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
CLRN1-206ENST00000485607 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
CLRN1-206ENST00000485607 TJP1Q07157 1748 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 KIAA1551Q9HCM1 1747 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 ADCY9O60503 1353 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 BMP2P12643 396 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 GYS1P13807 737 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
CLRN1-206ENST00000485607 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 VSIG10Q8N0Z9 540 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 LGR6Q9HBX8 967 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 C10orf71Q711Q0 1435 aa10.05□□□□□ -0.8
CLRN1-206ENST00000485607 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 MRC1P22897 1456 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 RPS6KA4O75676 772 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 CRKLP46109 303 aaKnown RBP10.04□□□□□ -0.8
CLRN1-206ENST00000485607 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 TSC1Q92574 1164 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 ITPKCQ96DU7 683 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 MAP10Q9P2G4 905 aa10.04□□□□□ -0.8
CLRN1-206ENST00000485607 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
CLRN1-206ENST00000485607 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
CLRN1-206ENST00000485607 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
CLRN1-206ENST00000485607 GIGYF1O75420 1035 aaPredicted RBP10.03□□□□□ -0.8
CLRN1-206ENST00000485607 MTHFSDQ2M296 383 aaKnown RBP10.03□□□□□ -0.8
CLRN1-206ENST00000485607 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
CLRN1-206ENST00000485607 INTS5Q6P9B9 1019 aaKnown RBP10.03□□□□□ -0.8
CLRN1-206ENST00000485607 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
CLRN1-206ENST00000485607 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
CLRN1-206ENST00000485607 SLC52A2Q9HAB3 445 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms