RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 CUL4AQ13619 759 aa9.53□□□□□ -0.88
SRRM1-214ENST00000485541 RC3H1Q5TC82 1133 aaKnown RBP9.53□□□□□ -0.88
SRRM1-214ENST00000485541 ZNF512BQ96KM6 892 aaPredicted RBP9.53□□□□□ -0.88
SRRM1-214ENST00000485541 FSD1Q9BTV5 496 aa9.53□□□□□ -0.88
SRRM1-214ENST00000485541 CCDC8Q9H0W5 538 aaPredicted RBP9.53□□□□□ -0.88
SRRM1-214ENST00000485541 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
SRRM1-214ENST00000485541 CCDC9Q9Y3X0 531 aaKnown RBP9.53□□□□□ -0.88
SRRM1-214ENST00000485541 MYO5AQ9Y4I1 1855 aaKnown RBP9.53□□□□□ -0.88
SRRM1-214ENST00000485541 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
SRRM1-214ENST00000485541 TCHHQ07283 1943 aa9.52□□□□□ -0.88
SRRM1-214ENST00000485541 ANKRD18BA2A2Z9 1011 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 ATRNO75882 1429 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
SRRM1-214ENST00000485541 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
SRRM1-214ENST00000485541 CRKLP46109 303 aaKnown RBP9.52□□□□□ -0.89
SRRM1-214ENST00000485541 NEK4P51957 841 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 TSGA10IPQ3SY00 556 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
SRRM1-214ENST00000485541 CWC27Q6UX04 472 aaKnown RBP9.52□□□□□ -0.89
SRRM1-214ENST00000485541 KBTBD3Q8NAB2 608 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 KLHDC4Q8TBB5 520 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 MAP4K1Q92918 833 aa9.52□□□□□ -0.89
SRRM1-214ENST00000485541 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 IRS4O14654 1257 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 ZFYP08048 801 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 PSMA5P28066 241 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 MCM4P33991 863 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 KRT32Q14532 448 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 NECTIN1Q15223 517 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 CCDC158Q5M9N0 1113 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 TTLL11Q8NHH1 800 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 BOLA2Q9H3K6 86 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 TRMT112Q9UI30 125 aaKnown RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-214ENST00000485541 CCDC88AQ3V6T2 1871 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
SRRM1-214ENST00000485541 RPAP1Q9BWH6 1393 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 A0A1B0GUL7 405 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 CAMTA2O94983 1202 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 MAP4K4O95819 1239 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 NMIQ13287 307 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 HLFQ16534 295 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 SKOR2Q2VWA4 1001 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 VPS53Q5VIR6 699 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 USPL1Q5W0Q7 1092 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 FAM89AQ96GI7 184 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 ZSCAN31Q96LW9 406 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 USP21Q9UK80 565 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 SNX14Q9Y5W7 946 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-214ENST00000485541 MROH5Q6ZUA9 1318 aa9.5□□□□□ -0.89
SRRM1-214ENST00000485541 MYH15Q9Y2K3 1946 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
SRRM1-214ENST00000485541 IFIT1P09914 478 aaKnown RBP9.49□□□□□ -0.89
SRRM1-214ENST00000485541 ITGA6P23229 1130 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 ITPK1Q13572 414 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 ANKRD1Q15327 319 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 FAM98CQ17RN3 349 aaKnown RBP9.49□□□□□ -0.89
SRRM1-214ENST00000485541 MCMDC2Q4G0Z9 681 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 JARID2Q92833 1246 aaPredicted RBP9.49□□□□□ -0.89
SRRM1-214ENST00000485541 TMX3Q96JJ7 454 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 TTC14Q96N46 770 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 DSCC1Q9BVC3 393 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 IL25Q9H293 177 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 PAG1Q9NWQ8 432 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 PALD1Q9ULE6 856 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 RIPOR2Q9Y4F9 1068 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 RGPD3A6NKT7 1758 aaPredicted RBP9.49□□□□□ -0.89
SRRM1-214ENST00000485541 RGPD4Q7Z3J3 1758 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
SRRM1-214ENST00000485541 UQCRFS1P1P0C7P4 283 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 SSFA2P28290 1259 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 MNX1P50219 401 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-214ENST00000485541 TTF1Q15361 905 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-214ENST00000485541 ATP2B3Q16720 1220 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 CCDC152Q4G0S7 254 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 LRRC24Q50LG9 513 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 LDHAL6AQ6ZMR3 332 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 IFNLR1Q8IU57 520 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-214ENST00000485541 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
SRRM1-214ENST00000485541 CHMP4CQ96CF2 233 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 ACSBG1Q96GR2 724 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 NEUROD6Q96NK8 337 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
SRRM1-214ENST00000485541 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms