RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
EXOSC1-210ENST00000485122 KCNQ3O43525 872 aa13.74□□□□□ -0.21
EXOSC1-210ENST00000485122 BCAMP50895 628 aa13.74□□□□□ -0.21
EXOSC1-210ENST00000485122 SP3Q02447 781 aa13.74□□□□□ -0.21
EXOSC1-210ENST00000485122 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
EXOSC1-210ENST00000485122 RPS12P25398 132 aaKnown RBP13.73□□□□□ -0.21
EXOSC1-210ENST00000485122 TCIRG1Q13488 830 aa13.73□□□□□ -0.21
EXOSC1-210ENST00000485122 SNX27Q96L92 541 aa13.73□□□□□ -0.21
EXOSC1-210ENST00000485122 FZD1Q9UP38 647 aa13.73□□□□□ -0.21
EXOSC1-210ENST00000485122 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
EXOSC1-210ENST00000485122 UBN2Q6ZU65 1347 aa13.72□□□□□ -0.21
EXOSC1-210ENST00000485122 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
EXOSC1-210ENST00000485122 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
EXOSC1-210ENST00000485122 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
EXOSC1-210ENST00000485122 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
EXOSC1-210ENST00000485122 MANSC4A6NHS7 340 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-210ENST00000485122 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
EXOSC1-210ENST00000485122 GPTP24298 496 aa13.71□□□□□ -0.21
EXOSC1-210ENST00000485122 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
EXOSC1-210ENST00000485122 FAM161BQ96MY7 647 aa13.71□□□□□ -0.21
EXOSC1-210ENST00000485122 EYSQ5T1H1 3165 aa13.71□□□□□ -0.21
EXOSC1-210ENST00000485122 IRS2Q9Y4H2 1338 aa13.7□□□□□ -0.22
EXOSC1-210ENST00000485122 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
EXOSC1-210ENST00000485122 ECE2O60344 883 aa13.7□□□□□ -0.22
EXOSC1-210ENST00000485122 EVI5O60447 810 aa13.7□□□□□ -0.22
EXOSC1-210ENST00000485122 GDF15Q99988 308 aa13.7□□□□□ -0.22
EXOSC1-210ENST00000485122 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
EXOSC1-210ENST00000485122 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
EXOSC1-210ENST00000485122 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
EXOSC1-210ENST00000485122 SUSD4Q5VX71 490 aa13.69□□□□□ -0.22
EXOSC1-210ENST00000485122 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
EXOSC1-210ENST00000485122 HMOX1P09601 288 aa13.68□□□□□ -0.22
EXOSC1-210ENST00000485122 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
EXOSC1-210ENST00000485122 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
EXOSC1-210ENST00000485122 ARHGAP39Q9C0H5 1083 aa13.68□□□□□ -0.22
EXOSC1-210ENST00000485122 IBTKQ9P2D0 1353 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-210ENST00000485122 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
EXOSC1-210ENST00000485122 NTSR2O95665 410 aa13.67□□□□□ -0.22
EXOSC1-210ENST00000485122 ANKRD36CQ5JPF3 1778 aa13.67□□□□□ -0.22
EXOSC1-210ENST00000485122 PSME4Q14997 1843 aa13.67□□□□□ -0.22
EXOSC1-210ENST00000485122 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 RGL2O15211 777 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 BMP8BP34820 402 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 IL13P35225 146 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 ZNF280AP59817 542 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 TEFQ10587 303 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 WNK4Q96J92 1243 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 CLMNQ96JQ2 1002 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 ZMYND8Q9ULU4 1186 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 COL4A1P02462 1669 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 MUC3AQ02505 3323 aa13.66□□□□□ -0.22
EXOSC1-210ENST00000485122 GJA8P48165 433 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 INHBEP58166 350 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 LDLRAD1Q5T700 205 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 ARMC9Q7Z3E5 817 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 IL17REQ8NFR9 667 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 PTPN18Q99952 460 aa13.65□□□□□ -0.22
EXOSC1-210ENST00000485122 VIL1P09327 827 aaKnown RBP13.64□□□□□ -0.23
EXOSC1-210ENST00000485122 NF2P35240 595 aa13.64□□□□□ -0.23
EXOSC1-210ENST00000485122 NBPF9Q3BBW0 867 aa13.64□□□□□ -0.23
EXOSC1-210ENST00000485122 TDHQ8IZJ6 230 aa13.64□□□□□ -0.23
EXOSC1-210ENST00000485122 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
EXOSC1-210ENST00000485122 MYOZ2Q9NPC6 264 aa13.64□□□□□ -0.23
EXOSC1-210ENST00000485122 GJA5P36382 358 aa13.63□□□□□ -0.23
EXOSC1-210ENST00000485122 NKX2-3Q8TAU0 364 aa13.63□□□□□ -0.23
EXOSC1-210ENST00000485122 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-210ENST00000485122 NLRP3Q96P20 1036 aa13.63□□□□□ -0.23
EXOSC1-210ENST00000485122 BBOX1O75936 387 aa13.62□□□□□ -0.23
EXOSC1-210ENST00000485122 SYN1P17600 705 aa13.62□□□□□ -0.23
EXOSC1-210ENST00000485122 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
EXOSC1-210ENST00000485122 PRUNE2Q8WUY3 3088 aa13.62□□□□□ -0.23
EXOSC1-210ENST00000485122 GJB1P08034 283 aa13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 ZBTB48P10074 688 aaPredicted RBP13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 CCL5P13501 91 aa13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 POLLQ9UGP5 575 aa13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 OTOFQ9HC10 1997 aa13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 SYNGAP1Q96PV0 1343 aa13.61□□□□□ -0.23
EXOSC1-210ENST00000485122 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 RNF208Q9H0X6 261 aa13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 ZBTB3Q9H5J0 574 aa13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 NSFL1CQ9UNZ2 370 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
EXOSC1-210ENST00000485122 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 GRAPQ13588 217 aa13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 RSBN1LQ6PCB5 846 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 GRAPLQ8TC17 118 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-210ENST00000485122 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
EXOSC1-210ENST00000485122 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.24
EXOSC1-210ENST00000485122 GMLQ99445 158 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms