RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 RAD17O75943 681 aa11.69□□□□□ -0.54
RPRD1B-205ENST00000484683 POLLQ9UGP5 575 aa11.69□□□□□ -0.54
RPRD1B-205ENST00000484683 CACNA1SQ13698 1873 aa11.69□□□□□ -0.54
RPRD1B-205ENST00000484683 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
RPRD1B-205ENST00000484683 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 CSF1RP07333 972 aa11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 CXCL9Q07325 125 aa11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 TRMT2AQ8IZ69 625 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 MINPP1Q9UNW1 487 aa11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
RPRD1B-205ENST00000484683 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 ECE2O60344 883 aa11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 CNNM1Q9NRU3 951 aa11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-205ENST00000484683 KIF16BQ96L93 1317 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 GMPSP49915 693 aaPredicted RBP11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 CASP7P55210 303 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 LDHAL6AQ6ZMR3 332 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 DPF2Q92785 391 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 GPRC5DQ9NZD1 345 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 CACNA1FO60840 1977 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 WDR90Q96KV7 1748 aa11.66□□□□□ -0.54
RPRD1B-205ENST00000484683 DICER1Q9UPY3 1922 aaKnown RBP11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 EPS15P42566 896 aa11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 SCNN1DP51172 638 aa11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 SLC51AQ86UW1 340 aa11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 CNOT7Q9UIV1 285 aaKnown RBP11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 CCDC88AQ3V6T2 1871 aa11.65□□□□□ -0.54
RPRD1B-205ENST00000484683 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 PSMD14O00487 310 aa11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 FOXO4P98177 505 aa11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 CHRNDQ07001 517 aa11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 ARHGAP45Q92619 1136 aa11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
RPRD1B-205ENST00000484683 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 YDJCA8MPS7 323 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 NBPF7P0C2Y1 421 aaPredicted RBP11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 MED23Q9ULK4 1368 aa11.63□□□□□ -0.55
RPRD1B-205ENST00000484683 UTYO14607 1347 aa11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 TMEM88BA6NKF7 163 aa11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 PLIN1O60240 522 aa11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 MMP14P50281 582 aa11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 MAP1SQ66K74 1059 aaPredicted RBP11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 FRAT1Q92837 279 aaPredicted RBP11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 SUCLG2Q96I99 432 aa11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
RPRD1B-205ENST00000484683 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 SCN4AP35499 1836 aa11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 RBM26Q5T8P6 1007 aaKnown RBP11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 RSBN1LQ6PCB5 846 aaPredicted RBP11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 ZNF804AQ7Z570 1209 aa11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 VPS37DQ86XT2 251 aa11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 LAMB2P55268 1798 aa11.61□□□□□ -0.55
RPRD1B-205ENST00000484683 MROH5Q6ZUA9 1318 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 TAF5LO75529 589 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 GNAI3P08754 354 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 STRIP1Q5VSL9 837 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 TTLL5Q6EMB2 1281 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 CDC37L1Q7L3B6 337 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 USP44Q9H0E7 712 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 HDAC9Q9UKV0 1011 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 ABT1Q9ULW3 272 aaKnown RBP11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
RPRD1B-205ENST00000484683 COL4A5P29400 1685 aa11.59□□□□□ -0.55
RPRD1B-205ENST00000484683 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
RPRD1B-205ENST00000484683 HTRA3P83110 453 aa11.59□□□□□ -0.55
RPRD1B-205ENST00000484683 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
RPRD1B-205ENST00000484683 RABL6Q3YEC7 729 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms