RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ARHGAP4P98171 946 aa9.53□□□□□ -0.88
CCDC66-219ENST00000484441 PLA2G4EQ3MJ16 856 aa9.53□□□□□ -0.88
CCDC66-219ENST00000484441 GJD3Q8N144 294 aa9.53□□□□□ -0.88
CCDC66-219ENST00000484441 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
CCDC66-219ENST00000484441 NSUN5Q96P11 429 aaKnown RBP9.53□□□□□ -0.88
CCDC66-219ENST00000484441 TUT1Q9H6E5 874 aaKnown RBP9.53□□□□□ -0.88
CCDC66-219ENST00000484441 SPATA31C1P0DKV0 1188 aa9.52□□□□□ -0.89
CCDC66-219ENST00000484441 USP5P45974 858 aa9.52□□□□□ -0.89
CCDC66-219ENST00000484441 COL13A1Q5TAT6 717 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-219ENST00000484441 ELMSAN1Q6PJG2 1045 aa9.52□□□□□ -0.89
CCDC66-219ENST00000484441 ZNF438Q7Z4V0 828 aa9.52□□□□□ -0.89
CCDC66-219ENST00000484441 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
CCDC66-219ENST00000484441 TTC39BQ5VTQ0 682 aaPredicted RBP9.51□□□□□ -0.89
CCDC66-219ENST00000484441 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
CCDC66-219ENST00000484441 GLYCTKQ8IVS8 523 aa9.51□□□□□ -0.89
CCDC66-219ENST00000484441 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
CCDC66-219ENST00000484441 SMG9Q9H0W8 520 aaKnown RBP9.51□□□□□ -0.89
CCDC66-219ENST00000484441 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
CCDC66-219ENST00000484441 A6NHS1 94 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 J3QW42 95 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 EHHADHQ08426 723 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 HYAL2Q12891 473 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 CHRDQ9H2X0 955 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 CNTN3Q9P232 1028 aa9.5□□□□□ -0.89
CCDC66-219ENST00000484441 GHRHP01286 108 aa9.49□□□□□ -0.89
CCDC66-219ENST00000484441 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
CCDC66-219ENST00000484441 IGHA1P01876 353 aa9.48□□□□□ -0.89
CCDC66-219ENST00000484441 C8orf34Q49A92 452 aa9.48□□□□□ -0.89
CCDC66-219ENST00000484441 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
CCDC66-219ENST00000484441 TRAIPQ9BWF2 469 aa9.48□□□□□ -0.89
CCDC66-219ENST00000484441 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 BAG6P46379 1132 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 AAMPQ13685 434 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 PRRT3Q5FWE3 981 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 CEP120Q8N960 986 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 C1orf127Q8N9H9 656 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 SALL4Q9UJQ4 1053 aa9.47□□□□□ -0.89
CCDC66-219ENST00000484441 SOWAHDA6NJG2 315 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 TNFRSF21O75509 655 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 PROCP04070 461 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 DTWD1Q8N5C7 304 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 TTC16Q8NEE8 873 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 SNX29Q8TEQ0 813 aa9.46□□□□□ -0.9
CCDC66-219ENST00000484441 CHRNA4P43681 627 aa9.45□□□□□ -0.9
CCDC66-219ENST00000484441 TRIM28Q13263 835 aaKnown RBP9.45□□□□□ -0.9
CCDC66-219ENST00000484441 CD163Q86VB7 1156 aa9.45□□□□□ -0.9
CCDC66-219ENST00000484441 CACTIN-AS1Q8N1I8 211 aa9.45□□□□□ -0.9
CCDC66-219ENST00000484441 FAM129BQ96TA1 746 aa9.45□□□□□ -0.9
CCDC66-219ENST00000484441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.45□□□□□ -0.9
CCDC66-219ENST00000484441 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 IGHA2P01877 340 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 ELNP15502 786 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 GPAT2Q6NUI2 795 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 WFDC8Q8IUA0 241 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-219ENST00000484441 PMEPA1Q969W9 287 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 SPACA7Q96KW9 195 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 CITED4Q96RK1 184 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 SPOCK3Q9BQ16 436 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 KANSL3Q9P2N6 904 aa9.44□□□□□ -0.9
CCDC66-219ENST00000484441 C1QTNF9BB2RNN3 333 aa9.43□□□□□ -0.9
CCDC66-219ENST00000484441 CES1P23141 567 aa9.43□□□□□ -0.9
CCDC66-219ENST00000484441 ATP11AP98196 1134 aa9.43□□□□□ -0.9
CCDC66-219ENST00000484441 KCNA1Q09470 495 aa9.43□□□□□ -0.9
CCDC66-219ENST00000484441 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-219ENST00000484441 BRPF3Q9ULD4 1205 aa9.43□□□□□ -0.9
CCDC66-219ENST00000484441 TRIM33Q9UPN9 1127 aa9.43□□□□□ -0.9
CCDC66-219ENST00000484441 NDUFB5O43674 189 aa9.42□□□□□ -0.9
CCDC66-219ENST00000484441 RAC1P63000 192 aa9.42□□□□□ -0.9
CCDC66-219ENST00000484441 NCAPG2Q86XI2 1143 aa9.42□□□□□ -0.9
CCDC66-219ENST00000484441 PBX4Q9BYU1 374 aa9.42□□□□□ -0.9
CCDC66-219ENST00000484441 RASSF4Q9H2L5 321 aa9.42□□□□□ -0.9
CCDC66-219ENST00000484441 FOXD3Q9UJU5 478 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-219ENST00000484441 NFKBIEO00221 500 aa9.41□□□□□ -0.9
CCDC66-219ENST00000484441 MSTNO14793 375 aa9.41□□□□□ -0.9
CCDC66-219ENST00000484441 PHACTR2O75167 634 aa9.41□□□□□ -0.9
CCDC66-219ENST00000484441 ADAMTSL4Q6UY14 1074 aa9.41□□□□□ -0.9
CCDC66-219ENST00000484441 NACC1Q96RE7 527 aa9.41□□□□□ -0.9
CCDC66-219ENST00000484441 EREGO14944 169 aa9.4□□□□□ -0.9
CCDC66-219ENST00000484441 SMNDC1O75940 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC66-219ENST00000484441 SELPP16109 830 aa9.4□□□□□ -0.9
CCDC66-219ENST00000484441 GRIK4Q16099 956 aa9.4□□□□□ -0.9
CCDC66-219ENST00000484441 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
CCDC66-219ENST00000484441 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
CCDC66-219ENST00000484441 RBCK1Q9BYM8 510 aa9.4□□□□□ -0.9
CCDC66-219ENST00000484441 SRA1Q9HD15 236 aaKnown RBP9.4□□□□□ -0.9
CCDC66-219ENST00000484441 DZANK1Q9NVP4 752 aa9.4□□□□□ -0.9
CCDC66-219ENST00000484441 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
CCDC66-219ENST00000484441 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
CCDC66-219ENST00000484441 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
CCDC66-219ENST00000484441 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
CCDC66-219ENST00000484441 ZFYVE28Q9HCC9 887 aa9.39□□□□□ -0.91
CCDC66-219ENST00000484441 APBA3O96018 575 aa9.38□□□□□ -0.91
CCDC66-219ENST00000484441 ACPPP15309 386 aa9.38□□□□□ -0.91
CCDC66-219ENST00000484441 LENG1Q96BZ8 264 aaPredicted RBP9.38□□□□□ -0.91
CCDC66-219ENST00000484441 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
CCDC66-219ENST00000484441 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms