RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 ZNF622Q969S3 477 aaKnown RBP eCLIP5.32□□□□□ -1.56
ABCD3-205ENST00000484213 NARFQ9UHQ1 456 aa5.32□□□□□ -1.56
ABCD3-205ENST00000484213 SERTAD1Q9UHV2 236 aa5.32□□□□□ -1.56
ABCD3-205ENST00000484213 ATP10DQ9P241 1426 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 ALS2Q96Q42 1657 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 TNNI2P48788 182 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 C2orf69Q8N8R5 385 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 PBXIP1Q96AQ6 731 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 NLRP3Q96P20 1036 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 IPO9Q96P70 1041 aaKnown RBP5.31□□□□□ -1.56
ABCD3-205ENST00000484213 MYH16Q9H6N6 1097 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 HOXB7P09629 217 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 CT47B1P0C2W7 299 aaPredicted RBP5.31□□□□□ -1.56
ABCD3-205ENST00000484213 FOSBP53539 338 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 C9orf131Q5VYM1 1079 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 SREBF2Q12772 1141 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 SWT1Q5T5J6 900 aaKnown RBP5.31□□□□□ -1.56
ABCD3-205ENST00000484213 NME9Q86XW9 330 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 ZNF784Q8NCA9 323 aaPredicted RBP5.31□□□□□ -1.56
ABCD3-205ENST00000484213 NOL10Q9BSC4 688 aaKnown RBP5.31□□□□□ -1.56
ABCD3-205ENST00000484213 TANGO6Q9C0B7 1094 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 RBM27Q9P2N5 1060 aaKnown RBP5.31□□□□□ -1.56
ABCD3-205ENST00000484213 PCDHB11Q9Y5F2 797 aa5.31□□□□□ -1.56
ABCD3-205ENST00000484213 FAM205CA6NFA0 338 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 NDUFB5O43674 189 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PRR7Q8TB68 274 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 CDC5LQ99459 802 aaKnown RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 MAST3O60307 1309 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PHRF1Q9P1Y6 1649 aaKnown RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 BBOX1O75936 387 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 MMP10P09238 476 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 HOXD10P28358 340 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 ATP1A2P50993 1020 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 DNM1Q05193 864 aaKnown RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 TNFAIP1Q13829 316 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 MCM6Q14566 821 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 ZNF428Q96B54 188 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PPP4R2Q9NY27 417 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 ERVV-1B6SEH8 477 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PPP1R12BO60237 982 aaPredicted RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PHKG2P15735 406 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PRMT2P55345 433 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 ANAPC15P60006 121 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 PSMD2Q13200 908 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 EML3Q32P44 896 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 MYSM1Q5VVJ2 828 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 USP50Q70EL3 339 aaPredicted RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 SGIP1Q9BQI5 828 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 BMP2KQ9NSY1 1161 aaPredicted RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 MKRN1Q9UHC7 482 aaKnown RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 GADD45BO75293 160 aaPredicted RBP5.3□□□□□ -1.56
ABCD3-205ENST00000484213 EMP3P54852 163 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 CERS3Q8IU89 383 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 OGFOD1Q8N543 542 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 TOPAZ1Q8N9V7 1692 aa5.3□□□□□ -1.56
ABCD3-205ENST00000484213 MEN1O00255 615 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 SSBP05455 408 aaKnown RBP eCLIP5.29□□□□□ -1.56
ABCD3-205ENST00000484213 NCLP19338 710 aaKnown RBP5.29□□□□□ -1.56
ABCD3-205ENST00000484213 GGCXP38435 758 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 INHBEP58166 350 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 SH3D19Q5HYK7 790 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 MICALL1Q8N3F8 863 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 NFATC2IPQ8NCF5 419 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 DCPSQ96C86 337 aaKnown RBP5.29□□□□□ -1.56
ABCD3-205ENST00000484213 ANKRD2Q9GZV1 360 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 SLKQ9H2G2 1235 aaPredicted RBP5.29□□□□□ -1.56
ABCD3-205ENST00000484213 CAPN10Q9HC96 672 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 MAP2K2P36507 400 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 KCNJ4P48050 445 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 Q3C1V9 767 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 ARHGEF28Q8N1W1 1705 aaKnown RBP5.29□□□□□ -1.56
ABCD3-205ENST00000484213 PHF14O94880 888 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 FOXK1P85037 733 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 TMED8Q6PL24 325 aaPredicted RBP5.29□□□□□ -1.56
ABCD3-205ENST00000484213 ARMC9Q7Z3E5 817 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 PNMA5Q96PV4 448 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 CRISPLD2Q9H0B8 497 aa5.29□□□□□ -1.56
ABCD3-205ENST00000484213 NRAPQ86VF7 1730 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 POM121CA8CG34 1229 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 NR6A1Q15406 480 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 INTS3Q68E01 1043 aaKnown RBP5.28□□□□□ -1.56
ABCD3-205ENST00000484213 TRIM50Q86XT4 487 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 EHBP1Q8NDI1 1231 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 KCTD12Q96CX2 325 aaKnown RBP5.28□□□□□ -1.56
ABCD3-205ENST00000484213 DOLKQ9UPQ8 538 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 TRPM3Q9HCF6 1732 aaPredicted RBP5.28□□□□□ -1.56
ABCD3-205ENST00000484213 FUT2Q10981 343 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 HHIPL1Q96JK4 782 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 SLC12A5Q9H2X9 1139 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 GGNBP2Q9H3C7 697 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 GNL3LQ9NVN8 582 aaKnown RBP5.28□□□□□ -1.56
ABCD3-205ENST00000484213 NHSQ6T4R5 1651 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 AKAP12Q02952 1782 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 FOXC1Q12948 553 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 NOGQ13253 232 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 TMEM87AQ8NBN3 555 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 TRIM55Q9BYV6 548 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 CBX8Q9HC52 389 aa5.28□□□□□ -1.56
ABCD3-205ENST00000484213 SAGE1Q9NXZ1 904 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms