RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ACIN1Q9UKV3 1341 aaKnown RBP7.53□□□□□ -1.2
SSBP1-211ENST00000484178 GHRHP01286 108 aa7.53□□□□□ -1.2
SSBP1-211ENST00000484178 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
SSBP1-211ENST00000484178 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
SSBP1-211ENST00000484178 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
SSBP1-211ENST00000484178 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
SSBP1-211ENST00000484178 MUC3BQ9H195 1237 aa7.53□□□□□ -1.2
SSBP1-211ENST00000484178 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
SSBP1-211ENST00000484178 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
SSBP1-211ENST00000484178 MYO15BQ96JP2 1530 aa7.52□□□□□ -1.2
SSBP1-211ENST00000484178 F8W735 103 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-211ENST00000484178 BRD2P25440 801 aaKnown RBP7.52□□□□□ -1.21
SSBP1-211ENST00000484178 RANGAP1P46060 587 aaPredicted RBP7.52□□□□□ -1.21
SSBP1-211ENST00000484178 SETDB1Q15047 1291 aa7.52□□□□□ -1.21
SSBP1-211ENST00000484178 OCLNQ16625 522 aa7.52□□□□□ -1.21
SSBP1-211ENST00000484178 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
SSBP1-211ENST00000484178 IL22RA1Q8N6P7 574 aa7.52□□□□□ -1.21
SSBP1-211ENST00000484178 J3QW42 95 aa7.51□□□□□ -1.21
SSBP1-211ENST00000484178 ETFBKMTQ8IXQ9 262 aa7.51□□□□□ -1.21
SSBP1-211ENST00000484178 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
SSBP1-211ENST00000484178 FAM69CQ0P6D2 419 aa7.5□□□□□ -1.21
SSBP1-211ENST00000484178 C16orf46Q6P387 395 aa7.5□□□□□ -1.21
SSBP1-211ENST00000484178 OR13H1Q8NG92 308 aa7.5□□□□□ -1.21
SSBP1-211ENST00000484178 FAM13BQ9NYF5 915 aa7.5□□□□□ -1.21
SSBP1-211ENST00000484178 FSTP19883 344 aa7.49□□□□□ -1.21
SSBP1-211ENST00000484178 RFX1P22670 979 aa7.49□□□□□ -1.21
SSBP1-211ENST00000484178 TRIM26Q12899 539 aaPredicted RBP7.49□□□□□ -1.21
SSBP1-211ENST00000484178 GDF6Q6KF10 455 aaPredicted RBP7.49□□□□□ -1.21
SSBP1-211ENST00000484178 NSUN5Q96P11 429 aaKnown RBP7.49□□□□□ -1.21
SSBP1-211ENST00000484178 TRIP4Q15650 581 aaPredicted RBP7.48□□□□□ -1.21
SSBP1-211ENST00000484178 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
SSBP1-211ENST00000484178 PPME1Q9Y570 386 aa7.48□□□□□ -1.21
SSBP1-211ENST00000484178 GSC2O15499 205 aa7.47□□□□□ -1.21
SSBP1-211ENST00000484178 ALX3O95076 343 aa7.47□□□□□ -1.21
SSBP1-211ENST00000484178 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.47□□□□□ -1.21
SSBP1-211ENST00000484178 PIK3R5Q8WYR1 880 aa7.47□□□□□ -1.21
SSBP1-211ENST00000484178 SAP130Q9H0E3 1048 aa7.47□□□□□ -1.21
SSBP1-211ENST00000484178 ZMIZ1Q9ULJ6 1067 aa7.47□□□□□ -1.21
SSBP1-211ENST00000484178 TRIM33Q9UPN9 1127 aa7.47□□□□□ -1.21
SSBP1-211ENST00000484178 TNFRSF10BO14763 440 aa7.46□□□□□ -1.22
SSBP1-211ENST00000484178 TM4SF5O14894 197 aa7.46□□□□□ -1.22
SSBP1-211ENST00000484178 KIF4AO95239 1232 aa7.46□□□□□ -1.22
SSBP1-211ENST00000484178 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.22
SSBP1-211ENST00000484178 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.22
SSBP1-211ENST00000484178 PRIMPOLQ96LW4 560 aa7.46□□□□□ -1.22
SSBP1-211ENST00000484178 PRMT3O60678 531 aa7.45□□□□□ -1.22
SSBP1-211ENST00000484178 PTCD1O75127 700 aaKnown RBP7.45□□□□□ -1.22
SSBP1-211ENST00000484178 CD97P48960 835 aa7.45□□□□□ -1.22
SSBP1-211ENST00000484178 FAM26DQ5JW98 314 aa7.45□□□□□ -1.22
SSBP1-211ENST00000484178 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-211ENST00000484178 FNDC3AQ9Y2H6 1198 aaKnown RBP7.45□□□□□ -1.22
SSBP1-211ENST00000484178 RAXQ9Y2V3 346 aa7.45□□□□□ -1.22
SSBP1-211ENST00000484178 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
SSBP1-211ENST00000484178 HYAL2Q12891 473 aa7.44□□□□□ -1.22
SSBP1-211ENST00000484178 UVSSAQ2YD98 709 aa7.44□□□□□ -1.22
SSBP1-211ENST00000484178 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
SSBP1-211ENST00000484178 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
SSBP1-211ENST00000484178 GALNT11Q8NCW6 608 aa7.44□□□□□ -1.22
SSBP1-211ENST00000484178 SMNDC1O75940 238 aaKnown RBP eCLIP7.43□□□□□ -1.22
SSBP1-211ENST00000484178 SPACA7Q96KW9 195 aa7.43□□□□□ -1.22
SSBP1-211ENST00000484178 UBL7Q96S82 380 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-211ENST00000484178 CEP41Q9BYV8 373 aa7.43□□□□□ -1.22
SSBP1-211ENST00000484178 PCMTD2Q9NV79 361 aa7.43□□□□□ -1.22
SSBP1-211ENST00000484178 ZNF777Q9ULD5 760 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-211ENST00000484178 COL17A1Q9UMD9 1497 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-211ENST00000484178 KIAA1324LA8MWY0 1029 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-211ENST00000484178 ATG7O95352 703 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 IGLV1-40P01703 118 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 GLB1P16278 677 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 CD68P34810 354 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-211ENST00000484178 ZAP70P43403 619 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 COL13A1Q5TAT6 717 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-211ENST00000484178 MCTP1Q6DN14 999 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 AGGF1Q8N302 714 aaeCLIP7.42□□□□□ -1.22
SSBP1-211ENST00000484178 KLHL23Q8NBE8 558 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 C1orf115Q9H7X2 142 aa7.42□□□□□ -1.22
SSBP1-211ENST00000484178 DHX15O43143 795 aaKnown RBP7.41□□□□□ -1.22
SSBP1-211ENST00000484178 CDC27P30260 824 aa7.41□□□□□ -1.22
SSBP1-211ENST00000484178 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
SSBP1-211ENST00000484178 ABI2Q9NYB9 513 aaPredicted RBP7.41□□□□□ -1.22
SSBP1-211ENST00000484178 STIM2Q9P246 746 aa7.41□□□□□ -1.22
SSBP1-211ENST00000484178 LINC01387J3KSC0 135 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 TTC39BQ5VTQ0 682 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-211ENST00000484178 PDE12Q6L8Q7 609 aaKnown RBP7.4□□□□□ -1.22
SSBP1-211ENST00000484178 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 ARMC10Q8N2F6 343 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 CEP120Q8N960 986 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 ABTB2Q8N961 1025 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
SSBP1-211ENST00000484178 FAM46AQ96IP4 442 aaKnown RBP7.4□□□□□ -1.22
SSBP1-211ENST00000484178 PBX4Q9BYU1 374 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 ADAM19Q9H013 955 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 STOML1Q9UBI4 398 aa7.4□□□□□ -1.22
SSBP1-211ENST00000484178 WISP1O95388 367 aa7.39□□□□□ -1.23
SSBP1-211ENST00000484178 ATP11AP98196 1134 aa7.39□□□□□ -1.23
SSBP1-211ENST00000484178 CEP135Q66GS9 1140 aa7.39□□□□□ -1.23
SSBP1-211ENST00000484178 CAPN12Q6ZSI9 719 aa7.39□□□□□ -1.23
SSBP1-211ENST00000484178 FSCN2O14926 492 aa7.38□□□□□ -1.23
SSBP1-211ENST00000484178 COBLO75128 1261 aa7.38□□□□□ -1.23
SSBP1-211ENST00000484178 SCNN1AP37088 669 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms