RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 STARD3NLO95772 234 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 NBPF7P0C2Y1 421 aaPredicted RBP6.68□□□□□ -1.34
COL17A1-206ENST00000483876 EN2P19622 333 aaPredicted RBP6.68□□□□□ -1.34
COL17A1-206ENST00000483876 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
COL17A1-206ENST00000483876 GCKRQ14397 625 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 PPP1R42Q7Z4L9 355 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 XAGE3Q8WTP9 111 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 CNKSR2Q8WXI2 1034 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 ZNF622Q969S3 477 aaKnown RBP eCLIP6.68□□□□□ -1.34
COL17A1-206ENST00000483876 LRCH3Q96II8 777 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 LRRCC1Q9C099 1032 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 ZNF408Q9H9D4 720 aa6.68□□□□□ -1.34
COL17A1-206ENST00000483876 UPF2Q9HAU5 1272 aaKnown RBP6.68□□□□□ -1.34
COL17A1-206ENST00000483876 MKI67P46013 3256 aaKnown RBP6.68□□□□□ -1.34
COL17A1-206ENST00000483876 UNC80Q8N2C7 3258 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 PNMA6EA0A0J9YXQ4 647 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 NEURL1BA8MQ27 555 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 NBPF26B4DH59 902 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 SOX1O00570 391 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-206ENST00000483876 ANXA1P04083 346 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 IGKV5-2P06315 115 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 LMOD1P29536 600 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-206ENST00000483876 TM4SF1P30408 202 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 HUNKP57058 714 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 RC3H1Q5TC82 1133 aaKnown RBP6.67□□□□□ -1.34
COL17A1-206ENST00000483876 NBPF10Q6P3W6 841 aaKnown RBP6.67□□□□□ -1.34
COL17A1-206ENST00000483876 ZNF296Q8WUU4 475 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-206ENST00000483876 ATG3Q9NT62 314 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 STAP2Q9UGK3 403 aa6.67□□□□□ -1.34
COL17A1-206ENST00000483876 DICER1Q9UPY3 1922 aaKnown RBP6.66□□□□□ -1.34
COL17A1-206ENST00000483876 FAM155AB1AL88 458 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-206ENST00000483876 H7C1W4 665 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 SRGAP3O43295 1099 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 MYL6BP14649 208 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 AIMP1Q12904 312 aaKnown RBP6.66□□□□□ -1.34
COL17A1-206ENST00000483876 TTC22Q5TAA0 569 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 USP50Q70EL3 339 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-206ENST00000483876 ERC1Q8IUD2 1116 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 GPC2Q8N158 579 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 DEFB123Q8N688 67 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 CCDC102AQ96A19 550 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 KIF1BPQ96EK5 621 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 ASAP1Q9ULH1 1129 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 AOX1Q06278 1338 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
COL17A1-206ENST00000483876 UBR2Q8IWV8 1755 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 CACNA1AO00555 2505 aa6.66□□□□□ -1.34
COL17A1-206ENST00000483876 PTCD1O75127 700 aaKnown RBP6.65□□□□□ -1.34
COL17A1-206ENST00000483876 SURF6O75683 361 aaKnown RBP6.65□□□□□ -1.34
COL17A1-206ENST00000483876 SEC24BO95487 1268 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 A1BGP04217 495 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 PDE1AP54750 535 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 CWF19L2Q2TBE0 894 aaKnown RBP6.65□□□□□ -1.34
COL17A1-206ENST00000483876 RABL6Q3YEC7 729 aaPredicted RBP6.65□□□□□ -1.34
COL17A1-206ENST00000483876 RGMBQ6NW40 437 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 CCDC191Q8NCU4 936 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 IL27Q8NEV9 243 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 RHPN1Q8TCX5 695 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 KAZALD1Q96I82 304 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 TBC1D32Q96NH3 1257 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 CSRNP1Q96S65 589 aa6.65□□□□□ -1.34
COL17A1-206ENST00000483876 SALL3Q9BXA9 1300 aa6.65□□□□□ -1.35
COL17A1-206ENST00000483876 CNTNAP4Q9C0A0 1308 aa6.65□□□□□ -1.35
COL17A1-206ENST00000483876 SPTBN5Q9NRC6 3674 aaKnown RBP6.65□□□□□ -1.35
COL17A1-206ENST00000483876 ERVV-1B6SEH8 477 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 RGL2O15211 777 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 EPB41L2O43491 1005 aaKnown RBP6.64□□□□□ -1.35
COL17A1-206ENST00000483876 CDC45O75419 566 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 SERPINB2P05120 415 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 CYP19A1P11511 503 aaPredicted RBP6.64□□□□□ -1.35
COL17A1-206ENST00000483876 IL6STP40189 918 aaPredicted RBP6.64□□□□□ -1.35
COL17A1-206ENST00000483876 EPS15P42566 896 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 RBM25P49756 843 aaKnown RBP6.64□□□□□ -1.35
COL17A1-206ENST00000483876 CASP7P55210 303 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 TCIRG1Q13488 830 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 HSP90AB3PQ58FF7 597 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 SOGA3Q5TF21 947 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 MYD88Q99836 296 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 ISCA1Q9BUE6 129 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 GLIS2Q9BZE0 524 aaPredicted RBP6.64□□□□□ -1.35
COL17A1-206ENST00000483876 PRO3102Q9H379 93 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 COPRSQ9NQ92 184 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 EXOC6BQ9Y2D4 811 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 GJA3Q9Y6H8 435 aa6.64□□□□□ -1.35
COL17A1-206ENST00000483876 A0A087WZG4 1122 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 A0A1W2PPC1 479 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 LAMB4A4D0S4 1761 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 FZD9O00144 591 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 MX1P20591 662 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-206ENST00000483876 G3BP1Q13283 466 aaKnown RBP eCLIP6.63□□□□□ -1.35
COL17A1-206ENST00000483876 FER1L6Q2WGJ9 1857 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 TTC41PQ6P2S7 1318 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 CASC1Q6TDU7 716 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 GIGYF2Q6Y7W6 1299 aaKnown RBP6.63□□□□□ -1.35
COL17A1-206ENST00000483876 Q7L0L9 218 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 TICAM2Q86XR7 235 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 DNAJC10Q8IXB1 793 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 CLASRPQ8N2M8 674 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms