RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 KIAA2012Q0VF49 1180 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 TAF7LQ5H9L4 462 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 DPY19L2Q6NUT2 758 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 LARGE2Q8N3Y3 721 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 TMEM57Q8N5G2 664 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 ANKRD44Q8N8A2 993 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 ANKRD2Q9GZV1 360 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 MINPP1Q9UNW1 487 aa19.56■□□□□ 0.72
RPP40-206ENST00000483546 A0A1B0GUL6 1792 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 ATP2B4P23634 1241 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 SLC51AQ86UW1 340 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 TBC1D16Q8TBP0 767 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 MEIS3Q99687 375 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 GPBP1L1Q9HC44 474 aaPredicted RBP19.55■□□□□ 0.72
RPP40-206ENST00000483546 GGA1Q9UJY5 639 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 TNNQ9UQP3 1299 aa19.55■□□□□ 0.72
RPP40-206ENST00000483546 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
RPP40-206ENST00000483546 FZD9O00144 591 aa19.54■□□□□ 0.72
RPP40-206ENST00000483546 NIM1KQ8IY84 436 aa19.54■□□□□ 0.72
RPP40-206ENST00000483546 C6orf229H3BNL8 230 aa19.53■□□□□ 0.72
RPP40-206ENST00000483546 UFL1O94874 794 aa19.53■□□□□ 0.72
RPP40-206ENST00000483546 WASHC4Q2M389 1173 aa19.53■□□□□ 0.72
RPP40-206ENST00000483546 LDHAL6AQ6ZMR3 332 aa19.53■□□□□ 0.72
RPP40-206ENST00000483546 POLLQ9UGP5 575 aa19.53■□□□□ 0.72
RPP40-206ENST00000483546 LEMD3Q9Y2U8 911 aa19.53■□□□□ 0.72
RPP40-206ENST00000483546 WDR90Q96KV7 1748 aa19.52■□□□□ 0.72
RPP40-206ENST00000483546 AOC3Q16853 763 aa19.52■□□□□ 0.72
RPP40-206ENST00000483546 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.72
RPP40-206ENST00000483546 COL4A5P29400 1685 aa19.52■□□□□ 0.71
RPP40-206ENST00000483546 GNAI2P04899 355 aa19.51■□□□□ 0.71
RPP40-206ENST00000483546 EIF6P56537 245 aaKnown RBP19.51■□□□□ 0.71
RPP40-206ENST00000483546 CHRNDQ07001 517 aa19.51■□□□□ 0.71
RPP40-206ENST00000483546 ITPRIPQ8IWB1 547 aa19.51■□□□□ 0.71
RPP40-206ENST00000483546 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
RPP40-206ENST00000483546 CHMP4BQ9H444 224 aaKnown RBP19.51■□□□□ 0.71
RPP40-206ENST00000483546 CNNM1Q9NRU3 951 aa19.51■□□□□ 0.71
RPP40-206ENST00000483546 FBXO3Q9UK99 471 aa19.51■□□□□ 0.71
RPP40-206ENST00000483546 ZNRF3Q9ULT6 936 aa19.51■□□□□ 0.71
RPP40-206ENST00000483546 MED23Q9ULK4 1368 aa19.5■□□□□ 0.71
RPP40-206ENST00000483546 RLBP1P12271 317 aa19.5■□□□□ 0.71
RPP40-206ENST00000483546 MTX1Q13505 466 aa19.5■□□□□ 0.71
RPP40-206ENST00000483546 PDE3AQ14432 1141 aa19.5■□□□□ 0.71
RPP40-206ENST00000483546 MROH5Q6ZUA9 1318 aa19.5■□□□□ 0.71
RPP40-206ENST00000483546 SCN4AP35499 1836 aa19.49■□□□□ 0.71
RPP40-206ENST00000483546 GPC2Q8N158 579 aa19.49■□□□□ 0.71
RPP40-206ENST00000483546 ZNF594Q96JF6 807 aaPredicted RBP19.49■□□□□ 0.71
RPP40-206ENST00000483546 ZBTB7BO15156 539 aaPredicted RBP19.48■□□□□ 0.71
RPP40-206ENST00000483546 ZNF526Q8TF50 670 aaPredicted RBP19.48■□□□□ 0.71
RPP40-206ENST00000483546 DDX19BQ9UMR2 479 aa19.48■□□□□ 0.71
RPP40-206ENST00000483546 ZNF804BA4D1E1 1349 aa19.48■□□□□ 0.71
RPP40-206ENST00000483546 PSME4Q14997 1843 aa19.47■□□□□ 0.71
RPP40-206ENST00000483546 KCNJ4P48050 445 aa19.47■□□□□ 0.71
RPP40-206ENST00000483546 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
RPP40-206ENST00000483546 MVPQ14764 893 aaKnown RBP19.47■□□□□ 0.71
RPP40-206ENST00000483546 PANK1Q8TE04 598 aa19.47■□□□□ 0.71
RPP40-206ENST00000483546 L3MBTL3Q96JM7 780 aaPredicted RBP19.47■□□□□ 0.71
RPP40-206ENST00000483546 RIPOR2Q9Y4F9 1068 aa19.47■□□□□ 0.71
RPP40-206ENST00000483546 ZNF541Q9H0D2 1346 aa19.47■□□□□ 0.71
RPP40-206ENST00000483546 PTPN12Q05209 780 aaKnown RBP19.46■□□□□ 0.71
RPP40-206ENST00000483546 C15orf52Q6ZUT6 534 aaKnown RBP19.46■□□□□ 0.71
RPP40-206ENST00000483546 IQCA1LA6NCM1 817 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 G3V3G9 751 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 EYA2O00167 538 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 RIMBP2O15034 1052 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 CIAO1O76071 339 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 VEGFAP15692 232 aaPredicted RBP19.45■□□□□ 0.7
RPP40-206ENST00000483546 TNIP1Q15025 636 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 DCAF8Q5TAQ9 597 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 COPRSQ9NQ92 184 aa19.45■□□□□ 0.7
RPP40-206ENST00000483546 SRGAP3O43295 1099 aa19.44■□□□□ 0.7
RPP40-206ENST00000483546 ECE2O60344 883 aa19.44■□□□□ 0.7
RPP40-206ENST00000483546 DDNO94850 711 aaPredicted RBP19.44■□□□□ 0.7
RPP40-206ENST00000483546 UBE4AQ14139 1066 aa19.44■□□□□ 0.7
RPP40-206ENST00000483546 CIAPIN1Q6FI81 312 aa19.44■□□□□ 0.7
RPP40-206ENST00000483546 PODNQ7Z5L7 613 aa19.44■□□□□ 0.7
RPP40-206ENST00000483546 NMRK2Q9NPI5 230 aa19.44■□□□□ 0.7
RPP40-206ENST00000483546 PLIN1O60240 522 aa19.43■□□□□ 0.7
RPP40-206ENST00000483546 CXCL9Q07325 125 aa19.43■□□□□ 0.7
RPP40-206ENST00000483546 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
RPP40-206ENST00000483546 COA1Q9GZY4 146 aa19.43■□□□□ 0.7
RPP40-206ENST00000483546 DBNDD1Q9H9R9 158 aa19.43■□□□□ 0.7
RPP40-206ENST00000483546 YDJCA8MPS7 323 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 KIF3CO14782 793 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 TAF5LO75529 589 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 LRRC24Q50LG9 513 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 METTL24Q5JXM2 366 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 HELBQ8NG08 1087 aaPredicted RBP19.42■□□□□ 0.7
RPP40-206ENST00000483546 GPR101Q96P66 508 aaPredicted RBP19.42■□□□□ 0.7
RPP40-206ENST00000483546 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 SCN9AQ15858 1988 aa19.42■□□□□ 0.7
RPP40-206ENST00000483546 PDE8BO95263 885 aa19.41■□□□□ 0.7
RPP40-206ENST00000483546 IL15P40933 162 aaPredicted RBP19.41■□□□□ 0.7
RPP40-206ENST00000483546 DOK7Q18PE1 504 aa19.41■□□□□ 0.7
RPP40-206ENST00000483546 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
RPP40-206ENST00000483546 COG6Q9Y2V7 657 aa19.41■□□□□ 0.7
RPP40-206ENST00000483546 GJA3Q9Y6H8 435 aa19.41■□□□□ 0.7
RPP40-206ENST00000483546 ZNF609O15014 1411 aa19.41■□□□□ 0.7
RPP40-206ENST00000483546 RRP1P56182 461 aaKnown RBP19.4■□□□□ 0.7
RPP40-206ENST00000483546 ATP8B2P98198 1209 aa19.4■□□□□ 0.7
RPP40-206ENST00000483546 ZNF804AQ7Z570 1209 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms