RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
COMMD6-210ENST00000483290 DEPDC4Q8N2C3 294 aa7.55□□□□□ -1.2
COMMD6-210ENST00000483290 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
COMMD6-210ENST00000483290 EIF2AK2P19525 551 aaKnown RBP7.54□□□□□ -1.2
COMMD6-210ENST00000483290 SPINK2P20155 84 aa7.54□□□□□ -1.2
COMMD6-210ENST00000483290 MLLT1Q03111 559 aaPredicted RBP7.54□□□□□ -1.2
COMMD6-210ENST00000483290 KRT25Q7Z3Z0 450 aa7.54□□□□□ -1.2
COMMD6-210ENST00000483290 RARAP10276 462 aa7.53□□□□□ -1.2
COMMD6-210ENST00000483290 PLAURQ03405 335 aa7.53□□□□□ -1.2
COMMD6-210ENST00000483290 HSP90AB4PQ58FF6 505 aa7.53□□□□□ -1.2
COMMD6-210ENST00000483290 Q6ZS46 218 aa7.53□□□□□ -1.2
COMMD6-210ENST00000483290 STAG2Q8N3U4 1231 aa7.53□□□□□ -1.2
COMMD6-210ENST00000483290 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
COMMD6-210ENST00000483290 KRTAP4-9Q9BYQ8 210 aa7.53□□□□□ -1.2
COMMD6-210ENST00000483290 GZF1Q9H116 711 aaPredicted RBP7.53□□□□□ -1.2
COMMD6-210ENST00000483290 ZBTB42B2RXF5 422 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 JAG1P78504 1218 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 NFIAQ12857 509 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 RTN1Q16799 776 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 ZDHHC13Q8IUH4 622 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 GAS2L2Q8NHY3 880 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 CEP41Q9BYV8 373 aa7.52□□□□□ -1.21
COMMD6-210ENST00000483290 CANXP27824 592 aaKnown RBP7.51□□□□□ -1.21
COMMD6-210ENST00000483290 DTX1Q86Y01 620 aa7.51□□□□□ -1.21
COMMD6-210ENST00000483290 AGGF1Q8N302 714 aaeCLIP7.51□□□□□ -1.21
COMMD6-210ENST00000483290 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
COMMD6-210ENST00000483290 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
COMMD6-210ENST00000483290 C11orf16Q9NQ32 467 aa7.51□□□□□ -1.21
COMMD6-210ENST00000483290 KIAA1024Q9UPX6 916 aa7.51□□□□□ -1.21
COMMD6-210ENST00000483290 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
COMMD6-210ENST00000483290 NRLP54845 237 aa7.5□□□□□ -1.21
COMMD6-210ENST00000483290 GDF6Q6KF10 455 aaPredicted RBP7.5□□□□□ -1.21
COMMD6-210ENST00000483290 HFE2Q6ZVN8 426 aa7.5□□□□□ -1.21
COMMD6-210ENST00000483290 LARGE2Q8N3Y3 721 aa7.5□□□□□ -1.21
COMMD6-210ENST00000483290 IL22RA1Q8N6P7 574 aa7.5□□□□□ -1.21
COMMD6-210ENST00000483290 TSEN2Q8NCE0 465 aaKnown RBP7.5□□□□□ -1.21
COMMD6-210ENST00000483290 CHMP7Q8WUX9 453 aaPredicted RBP7.5□□□□□ -1.21
COMMD6-210ENST00000483290 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
COMMD6-210ENST00000483290 PALM3A6NDB9 673 aaPredicted RBP7.49□□□□□ -1.21
COMMD6-210ENST00000483290 GHRHP01286 108 aa7.49□□□□□ -1.21
COMMD6-210ENST00000483290 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
COMMD6-210ENST00000483290 UVSSAQ2YD98 709 aa7.49□□□□□ -1.21
COMMD6-210ENST00000483290 PLD4Q96BZ4 506 aa7.49□□□□□ -1.21
COMMD6-210ENST00000483290 DBNDD2Q9BQY9 259 aa7.49□□□□□ -1.21
COMMD6-210ENST00000483290 ZFATQ9P243 1243 aa7.49□□□□□ -1.21
COMMD6-210ENST00000483290 IDH3AP50213 366 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 ARSDP51689 593 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.48□□□□□ -1.21
COMMD6-210ENST00000483290 EXOC8Q8IYI6 725 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 CACTIN-AS1Q8N1I8 211 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
COMMD6-210ENST00000483290 UTP4Q969X6 686 aaKnown RBP7.48□□□□□ -1.21
COMMD6-210ENST00000483290 IFT43Q96FT9 208 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 MUC3BQ9H195 1237 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 ALG2Q9H553 416 aa7.48□□□□□ -1.21
COMMD6-210ENST00000483290 C21orf2O43822 256 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 ADAMTS4O75173 837 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 SASH3O75995 380 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 CLDN10P78369 228 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 RNF43Q68DV7 783 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 PLEKHM2Q8IWE5 1019 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 FTSJ3Q8IY81 847 aaKnown RBP7.47□□□□□ -1.21
COMMD6-210ENST00000483290 OGFOD1Q8N543 542 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 UBL7Q96S82 380 aaPredicted RBP7.47□□□□□ -1.21
COMMD6-210ENST00000483290 ADGRE2Q9UHX3 823 aa7.47□□□□□ -1.21
COMMD6-210ENST00000483290 DMGDHQ9UI17 866 aaKnown RBP7.47□□□□□ -1.21
COMMD6-210ENST00000483290 INPP5BP32019 993 aa7.46□□□□□ -1.22
COMMD6-210ENST00000483290 SETDB1Q15047 1291 aa7.46□□□□□ -1.22
COMMD6-210ENST00000483290 C7orf69Q9H7B7 122 aa7.46□□□□□ -1.22
COMMD6-210ENST00000483290 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 PSAPP07602 524 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 OS9Q13438 667 aaPredicted RBP7.45□□□□□ -1.22
COMMD6-210ENST00000483290 OGFOD2Q6N063 350 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 SIX5Q8N196 739 aa7.45□□□□□ -1.22
COMMD6-210ENST00000483290 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
COMMD6-210ENST00000483290 LOC102724428A0A0B4J2F2 783 aa7.44□□□□□ -1.22
COMMD6-210ENST00000483290 SIK1P57059 783 aa7.44□□□□□ -1.22
COMMD6-210ENST00000483290 ACAD11Q709F0 780 aa7.44□□□□□ -1.22
COMMD6-210ENST00000483290 NOL8Q76FK4 1167 aaKnown RBP7.44□□□□□ -1.22
COMMD6-210ENST00000483290 TRIM42Q8IWZ5 723 aa7.44□□□□□ -1.22
COMMD6-210ENST00000483290 ARMC10Q8N2F6 343 aa7.44□□□□□ -1.22
COMMD6-210ENST00000483290 SECISBP2LQ93073 1101 aaKnown RBP7.44□□□□□ -1.22
COMMD6-210ENST00000483290 ANGEL1Q9UNK9 670 aaKnown RBP7.44□□□□□ -1.22
COMMD6-210ENST00000483290 BCS1LQ9Y276 419 aa7.44□□□□□ -1.22
COMMD6-210ENST00000483290 PRR19A6NJB7 356 aa7.43□□□□□ -1.22
COMMD6-210ENST00000483290 GRNP28799 593 aaKnown RBP7.43□□□□□ -1.22
COMMD6-210ENST00000483290 ASIC4Q96FT7 647 aa7.43□□□□□ -1.22
COMMD6-210ENST00000483290 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
COMMD6-210ENST00000483290 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
COMMD6-210ENST00000483290 LOC102724159A0A0B4J2E5 919 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 HMX2A2RU54 273 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 PLEKHD1A6NEE1 506 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 J3QW42 95 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 RASA1P20936 1047 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 FAM193AP78312 1265 aa7.42□□□□□ -1.22
COMMD6-210ENST00000483290 PWP2Q15269 919 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms