RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 PDCD7Q8N8D1 485 aaKnown RBP5.75□□□□□ -1.49
HDAC9-224ENST00000483142 SETDB2Q96T68 719 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 WDR70Q9NW82 654 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 PSME4Q14997 1843 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 FER1L6Q2WGJ9 1857 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 PSDA5PKW4 1024 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 IRS4O14654 1257 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 SEMA3EO15041 775 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 GNAI2P04899 355 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 ST5P78524 1137 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 HDAC1Q13547 482 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 ERFEQ4G0M1 354 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 MSL1Q68DK7 614 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 C3orf67Q6ZVT6 689 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 RPAP2Q8IXW5 612 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 TTLL11Q8NHH1 800 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 SSH3Q8TE77 659 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 LARP6Q9BRS8 491 aaKnown RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 BRIP1Q9BX63 1249 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 COPRSQ9NQ92 184 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 C9orf78Q9NZ63 289 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 TRMT112Q9UI30 125 aaKnown RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 LRRFIP2Q9Y608 721 aaKnown RBP5.74□□□□□ -1.49
HDAC9-224ENST00000483142 PARP3Q9Y6F1 533 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 SLX4Q8IY92 1834 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 KDM2BQ8NHM5 1336 aa5.74□□□□□ -1.49
HDAC9-224ENST00000483142 TAF1P21675 1872 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 MAST2Q6P0Q8 1798 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 ZBTB7AO95365 584 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 SRGNP10124 158 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 POLD1P28340 1107 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 FAM161AQ3B820 660 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 NUTM1Q86Y26 1132 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 SIRT2Q8IXJ6 389 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 EXOC6Q8TAG9 804 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 FAM89AQ96GI7 184 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 BICC1Q9H694 974 aaKnown RBP5.73□□□□□ -1.49
HDAC9-224ENST00000483142 SPON1Q9HCB6 807 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 NOP58Q9Y2X3 529 aaKnown RBP5.73□□□□□ -1.49
HDAC9-224ENST00000483142 CD2APQ9Y5K6 639 aa5.73□□□□□ -1.49
HDAC9-224ENST00000483142 DOCK2Q92608 1830 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 TIAM2Q8IVF5 1701 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 PNMA6EA0A0J9YXQ4 647 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 CIAO1O76071 339 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 NEFLP07196 543 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 PDE4AP27815 886 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 PDE6BP35913 854 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 ATP8B2P98198 1209 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 PTPN12Q05209 780 aaKnown RBP5.72□□□□□ -1.49
HDAC9-224ENST00000483142 GRAPQ13588 217 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 CCDC152Q4G0S7 254 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 STYK1Q6J9G0 422 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 DPY19L2Q6NUT2 758 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 BICDL1Q6ZP65 573 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 TMC4Q7Z404 712 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 SMC5Q8IY18 1101 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 GRAPLQ8TC17 118 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-224ENST00000483142 CRAMP1Q96RY5 1269 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 PCDHB15Q9Y5E8 787 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 IRS2Q9Y4H2 1338 aa5.72□□□□□ -1.49
HDAC9-224ENST00000483142 HMMRO75330 724 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 HCLS1P14317 486 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-224ENST00000483142 NPR1P16066 1061 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 TGFB2P61812 414 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 LMBR1LQ6UX01 489 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 SYNE4Q8N205 404 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 VGLL2Q8N8G2 317 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 MASTLQ96GX5 879 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 NLRP3Q96P20 1036 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 ARXQ96QS3 562 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 CDC5LQ99459 802 aaKnown RBP5.71□□□□□ -1.5
HDAC9-224ENST00000483142 TMEM121BQ9BXQ6 578 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-224ENST00000483142 GREM2Q9H772 168 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 C1orf115Q9H7X2 142 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 GPHNQ9NQX3 736 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-224ENST00000483142 DICER1Q9UPY3 1922 aaKnown RBP5.71□□□□□ -1.5
HDAC9-224ENST00000483142 SALL3Q9BXA9 1300 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 LTBP3Q9NS15 1303 aa5.71□□□□□ -1.5
HDAC9-224ENST00000483142 MYH13Q9UKX3 1938 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 MED23Q9ULK4 1368 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 ANKRD18BA2A2Z9 1011 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 EYA2O00167 538 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 SRGAP3O43295 1099 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 KCNA3P22001 575 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 ITGA6P23229 1130 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 IRX5P78411 483 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-224ENST00000483142 MKRN3Q13064 507 aaKnown RBP5.7□□□□□ -1.5
HDAC9-224ENST00000483142 ASTLQ6HA08 431 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-224ENST00000483142 ATG9AQ7Z3C6 839 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 CELF1Q92879 486 aaKnown RBP5.7□□□□□ -1.5
HDAC9-224ENST00000483142 GCC1Q96CN9 775 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 DDX27Q96GQ7 796 aaKnown RBP5.7□□□□□ -1.5
HDAC9-224ENST00000483142 DCTPP1Q9H773 170 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 GPR108Q9NPR9 543 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 PODXL2Q9NZ53 605 aa5.7□□□□□ -1.5
HDAC9-224ENST00000483142 COL4A5P29400 1685 aa5.69□□□□□ -1.5
HDAC9-224ENST00000483142 GTF2E1P29083 439 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 ATN1P54259 1190 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-224ENST00000483142 IRX6P78412 446 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms