RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PSAPP07602 524 aa6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 WFDC8Q8IUA0 241 aa6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 COL26A1Q96A83 441 aa6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 PBXIP1Q96AQ6 731 aa6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 NSUN5Q96P11 429 aaKnown RBP6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 USP21Q9UK80 565 aa6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 LOC102724428A0A0B4J2F2 783 aa6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 SIK1P57059 783 aa6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 NRG1Q02297 640 aaPredicted RBP6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 TXNRD3Q86VQ6 643 aa6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 TTC9Q92623 222 aa6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 CLP1Q92989 425 aaKnown RBP6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 PLD4Q96BZ4 506 aa6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 CCDC97Q96F63 343 aaPredicted RBP6.65□□□□□ -1.34
LAPTM4A-202ENST00000483117 FBXO11Q86XK2 927 aa6.64□□□□□ -1.35
LAPTM4A-202ENST00000483117 UBAP1LF5GYI3 381 aa6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 PTCD1O75127 700 aaKnown RBP6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 DEAF1O75398 565 aaPredicted RBP6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 GHRHP01286 108 aa6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 ZAP70P43403 619 aa6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 GDF6Q6KF10 455 aaPredicted RBP6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 NLRP13Q86W25 1043 aa6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 DTWD1Q8N5C7 304 aa6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 GPR152Q8TDT2 470 aa6.63□□□□□ -1.35
LAPTM4A-202ENST00000483117 ZBTB39O15060 712 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 SOX18P35713 384 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 FZD5Q13467 585 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 PIK3R5Q8WYR1 880 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 TP53INP1Q96A56 240 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 STIM2Q9P246 746 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 SEPT3Q9UH03 358 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 SERPINA10Q9UK55 444 aa6.62□□□□□ -1.35
LAPTM4A-202ENST00000483117 HOXD8P13378 290 aaPredicted RBP6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 IREB2P48200 963 aaKnown RBP6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 COL13A1Q5TAT6 717 aaPredicted RBP6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 IL22RA1Q8N6P7 574 aa6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 WFDC12Q8WWY7 111 aa6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 FAM13BQ9NYF5 915 aa6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 TRIM33Q9UPN9 1127 aa6.61□□□□□ -1.35
LAPTM4A-202ENST00000483117 NOS3P29474 1203 aa6.6□□□□□ -1.35
LAPTM4A-202ENST00000483117 SCNN1AP37088 669 aa6.6□□□□□ -1.35
LAPTM4A-202ENST00000483117 IGF2-ASQ6U949 168 aa6.6□□□□□ -1.35
LAPTM4A-202ENST00000483117 RBSNQ9H1K0 784 aa6.6□□□□□ -1.35
LAPTM4A-202ENST00000483117 DLL1O00548 723 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 H2AFB1P0C5Y9 115 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 ATCAYQ86WG3 371 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 OR13H1Q8NG92 308 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 GTF3C3Q9Y5Q9 886 aa6.59□□□□□ -1.35
LAPTM4A-202ENST00000483117 CYP2E1P05181 493 aaPredicted RBP6.58□□□□□ -1.36
LAPTM4A-202ENST00000483117 ATP11AP98196 1134 aa6.58□□□□□ -1.36
LAPTM4A-202ENST00000483117 ABTB2Q8N961 1025 aa6.58□□□□□ -1.36
LAPTM4A-202ENST00000483117 MEGF10Q96KG7 1140 aa6.58□□□□□ -1.36
LAPTM4A-202ENST00000483117 ALX3O95076 343 aa6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 TXKP42681 527 aa6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 HYAL2Q12891 473 aa6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 SETDB1Q15047 1291 aa6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 TTC39BQ5VTQ0 682 aaPredicted RBP6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 CCDC82Q8N4S0 544 aa6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 NUDT16Q96DE0 195 aaKnown RBP6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 ABI2Q9NYB9 513 aaPredicted RBP6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 FNDC3AQ9Y2H6 1198 aaKnown RBP6.57□□□□□ -1.36
LAPTM4A-202ENST00000483117 CEP135Q66GS9 1140 aa6.56□□□□□ -1.36
LAPTM4A-202ENST00000483117 ADAMTSL4Q6UY14 1074 aa6.56□□□□□ -1.36
LAPTM4A-202ENST00000483117 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
LAPTM4A-202ENST00000483117 LINC01387J3KSC0 135 aa6.55□□□□□ -1.36
LAPTM4A-202ENST00000483117 TXNDC11Q6PKC3 985 aa6.55□□□□□ -1.36
LAPTM4A-202ENST00000483117 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
LAPTM4A-202ENST00000483117 RASSF4Q9H2L5 321 aa6.55□□□□□ -1.36
LAPTM4A-202ENST00000483117 TMEM63CQ9P1W3 806 aa6.55□□□□□ -1.36
LAPTM4A-202ENST00000483117 KIF4AO95239 1232 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 CDC25BP30305 580 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 AGGF1Q8N302 714 aaeCLIP6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 HELQQ8TDG4 1101 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 EDEM1Q92611 657 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 MRPL18Q9H0U6 180 aaKnown RBP6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 AKTIPQ9H8T0 292 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 ELP3Q9H9T3 547 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 KANSL3Q9P2N6 904 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 PPME1Q9Y570 386 aa6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
LAPTM4A-202ENST00000483117 A6NHS1 94 aa6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 TMEM88BA6NKF7 163 aa6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 SMNDC1O75940 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 DNM1Q05193 864 aaKnown RBP6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 PDE12Q6L8Q7 609 aaKnown RBP6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 ZNF438Q7Z4V0 828 aa6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 GGNBP2Q9H3C7 697 aa6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 C1orf115Q9H7X2 142 aa6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 SRA1Q9HD15 236 aaKnown RBP6.53□□□□□ -1.36
LAPTM4A-202ENST00000483117 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 ACPPP15309 386 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms