RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NIM1KQ8IY84 436 aa20.81■□□□□ 0.92
HMGN1-214ENST00000482733 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
HMGN1-214ENST00000482733 TBC1D16Q8TBP0 767 aa20.81■□□□□ 0.92
HMGN1-214ENST00000482733 ANKRD2Q9GZV1 360 aa20.81■□□□□ 0.92
HMGN1-214ENST00000482733 TAF1P21675 1872 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 FZD9O00144 591 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 ATP2B4P23634 1241 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 AOC3Q16853 763 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 WASHC4Q2M389 1173 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 ANKRD44Q8N8A2 993 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 POLLQ9UGP5 575 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 TNNQ9UQP3 1299 aa20.8■□□□□ 0.92
HMGN1-214ENST00000482733 UFL1O94874 794 aa20.79■□□□□ 0.92
HMGN1-214ENST00000482733 TMEM57Q8N5G2 664 aa20.79■□□□□ 0.92
HMGN1-214ENST00000482733 MEIS3Q99687 375 aa20.79■□□□□ 0.92
HMGN1-214ENST00000482733 EIF6P56537 245 aaKnown RBP20.78■□□□□ 0.92
HMGN1-214ENST00000482733 LDHAL6AQ6ZMR3 332 aa20.78■□□□□ 0.92
HMGN1-214ENST00000482733 ZC3H12CQ9C0D7 883 aaKnown RBP20.78■□□□□ 0.92
HMGN1-214ENST00000482733 ZNRF3Q9ULT6 936 aa20.77■□□□□ 0.92
HMGN1-214ENST00000482733 LEMD3Q9Y2U8 911 aa20.77■□□□□ 0.92
HMGN1-214ENST00000482733 LRRFIP2Q9Y608 721 aaKnown RBP20.77■□□□□ 0.92
HMGN1-214ENST00000482733 TIAM2Q8IVF5 1701 aa20.77■□□□□ 0.92
HMGN1-214ENST00000482733 DUOX1Q9NRD9 1551 aa20.76■□□□□ 0.91
HMGN1-214ENST00000482733 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
HMGN1-214ENST00000482733 CHRNDQ07001 517 aa20.76■□□□□ 0.91
HMGN1-214ENST00000482733 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-214ENST00000482733 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-214ENST00000482733 CNNM1Q9NRU3 951 aa20.76■□□□□ 0.91
HMGN1-214ENST00000482733 CCDC88AQ3V6T2 1871 aa20.75■□□□□ 0.91
HMGN1-214ENST00000482733 RIMBP2O15034 1052 aa20.74■□□□□ 0.91
HMGN1-214ENST00000482733 DDNO94850 711 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-214ENST00000482733 GNAI2P04899 355 aa20.74■□□□□ 0.91
HMGN1-214ENST00000482733 ITPRIPQ8IWB1 547 aa20.74■□□□□ 0.91
HMGN1-214ENST00000482733 GPC2Q8N158 579 aa20.74■□□□□ 0.91
HMGN1-214ENST00000482733 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
HMGN1-214ENST00000482733 ZNF541Q9H0D2 1346 aa20.74■□□□□ 0.91
HMGN1-214ENST00000482733 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
HMGN1-214ENST00000482733 RLBP1P12271 317 aa20.73■□□□□ 0.91
HMGN1-214ENST00000482733 KCNJ4P48050 445 aa20.73■□□□□ 0.91
HMGN1-214ENST00000482733 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
HMGN1-214ENST00000482733 COL4A5P29400 1685 aa20.73■□□□□ 0.91
HMGN1-214ENST00000482733 ZNF804BA4D1E1 1349 aa20.73■□□□□ 0.91
HMGN1-214ENST00000482733 MED23Q9ULK4 1368 aa20.72■□□□□ 0.91
HMGN1-214ENST00000482733 G3V3G9 751 aa20.72■□□□□ 0.91
HMGN1-214ENST00000482733 VEGFAP15692 232 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-214ENST00000482733 DCAF8Q5TAQ9 597 aa20.72■□□□□ 0.91
HMGN1-214ENST00000482733 L3MBTL3Q96JM7 780 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-214ENST00000482733 MROH5Q6ZUA9 1318 aa20.72■□□□□ 0.91
HMGN1-214ENST00000482733 IQCA1LA6NCM1 817 aa20.71■□□□□ 0.91
HMGN1-214ENST00000482733 KIF3CO14782 793 aa20.71■□□□□ 0.91
HMGN1-214ENST00000482733 RFX5P48382 616 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-214ENST00000482733 TNIP1Q15025 636 aa20.71■□□□□ 0.91
HMGN1-214ENST00000482733 PANK1Q8TE04 598 aa20.71■□□□□ 0.91
HMGN1-214ENST00000482733 GPR101Q96P66 508 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-214ENST00000482733 FBXO3Q9UK99 471 aa20.71■□□□□ 0.91
HMGN1-214ENST00000482733 RIPOR2Q9Y4F9 1068 aa20.71■□□□□ 0.91
HMGN1-214ENST00000482733 ZBTB7BO15156 539 aaPredicted RBP20.7■□□□□ 0.9
HMGN1-214ENST00000482733 ECE2O60344 883 aa20.7■□□□□ 0.9
HMGN1-214ENST00000482733 CXCL9Q07325 125 aa20.7■□□□□ 0.9
HMGN1-214ENST00000482733 MTX1Q13505 466 aa20.7■□□□□ 0.9
HMGN1-214ENST00000482733 CIAPIN1Q6FI81 312 aa20.7■□□□□ 0.9
HMGN1-214ENST00000482733 DBNDD1Q9H9R9 158 aa20.7■□□□□ 0.9
HMGN1-214ENST00000482733 GJA3Q9Y6H8 435 aa20.7■□□□□ 0.9
HMGN1-214ENST00000482733 TAF5LO75529 589 aa20.69■□□□□ 0.9
HMGN1-214ENST00000482733 PTPN12Q05209 780 aaKnown RBP20.69■□□□□ 0.9
HMGN1-214ENST00000482733 PDE3AQ14432 1141 aa20.69■□□□□ 0.9
HMGN1-214ENST00000482733 DOK7Q18PE1 504 aa20.69■□□□□ 0.9
HMGN1-214ENST00000482733 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
HMGN1-214ENST00000482733 PUS3Q9BZE2 481 aaKnown RBP20.69■□□□□ 0.9
HMGN1-214ENST00000482733 YDJCA8MPS7 323 aa20.68■□□□□ 0.9
HMGN1-214ENST00000482733 EYA2O00167 538 aa20.68■□□□□ 0.9
HMGN1-214ENST00000482733 PLIN1O60240 522 aa20.68■□□□□ 0.9
HMGN1-214ENST00000482733 C15orf52Q6ZUT6 534 aaKnown RBP20.68■□□□□ 0.9
HMGN1-214ENST00000482733 PODNQ7Z5L7 613 aa20.68■□□□□ 0.9
HMGN1-214ENST00000482733 HELBQ8NG08 1087 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-214ENST00000482733 CHMP4BQ9H444 224 aaKnown RBP20.68■□□□□ 0.9
HMGN1-214ENST00000482733 WDR90Q96KV7 1748 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 SRGAP3O43295 1099 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 RAD17O75943 681 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 UBE4AQ14139 1066 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
HMGN1-214ENST00000482733 LRRC24Q50LG9 513 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 KLHDC4Q8TBB5 520 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 COA1Q9GZY4 146 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 COPRSQ9NQ92 184 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 DDX19BQ9UMR2 479 aa20.67■□□□□ 0.9
HMGN1-214ENST00000482733 WTIPA6NIX2 430 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-214ENST00000482733 POTECB2RU33 542 aa20.66■□□□□ 0.9
HMGN1-214ENST00000482733 CIAO1O76071 339 aa20.66■□□□□ 0.9
HMGN1-214ENST00000482733 TOMM70O94826 608 aa20.66■□□□□ 0.9
HMGN1-214ENST00000482733 LMOD1P29536 600 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-214ENST00000482733 HACL1Q9UJ83 578 aa20.66■□□□□ 0.9
HMGN1-214ENST00000482733 SPEF2Q9C093 1822 aa20.66■□□□□ 0.9
HMGN1-214ENST00000482733 PDE8BO95263 885 aa20.64■□□□□ 0.89
HMGN1-214ENST00000482733 PSMD14O00487 310 aa20.63■□□□□ 0.89
HMGN1-214ENST00000482733 RPS12P25398 132 aaKnown RBP20.63■□□□□ 0.89
HMGN1-214ENST00000482733 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-214ENST00000482733 ZNF804AQ7Z570 1209 aa20.63■□□□□ 0.89
HMGN1-214ENST00000482733 TXNRD3Q86VQ6 643 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms