RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RIMBP2O15034 1052 aa23.13■■□□□ 1.29
SMIM4-204ENST00000482728 UFL1O94874 794 aa23.13■■□□□ 1.29
SMIM4-204ENST00000482728 TAF7LQ5H9L4 462 aa23.13■■□□□ 1.29
SMIM4-204ENST00000482728 ZC3H12CQ9C0D7 883 aaKnown RBP23.13■■□□□ 1.29
SMIM4-204ENST00000482728 MINPP1Q9UNW1 487 aa23.13■■□□□ 1.29
SMIM4-204ENST00000482728 COL4A1P02462 1669 aa23.13■■□□□ 1.29
SMIM4-204ENST00000482728 ZNF541Q9H0D2 1346 aa23.12■■□□□ 1.29
SMIM4-204ENST00000482728 TOMM70O94826 608 aa23.12■■□□□ 1.29
SMIM4-204ENST00000482728 GJA3Q9Y6H8 435 aa23.12■■□□□ 1.29
SMIM4-204ENST00000482728 LRRC37AA6NMS7 1700 aa23.11■■□□□ 1.29
SMIM4-204ENST00000482728 G3V3G9 751 aa23.11■■□□□ 1.29
SMIM4-204ENST00000482728 ATP2B4P23634 1241 aa23.11■■□□□ 1.29
SMIM4-204ENST00000482728 DCAF8Q5TAQ9 597 aa23.11■■□□□ 1.29
SMIM4-204ENST00000482728 ATF7IPQ6VMQ6 1270 aa23.11■■□□□ 1.29
SMIM4-204ENST00000482728 GPC2Q8N158 579 aa23.11■■□□□ 1.29
SMIM4-204ENST00000482728 KAZALD1Q96I82 304 aa23.1■■□□□ 1.29
SMIM4-204ENST00000482728 ANKRD2Q9GZV1 360 aa23.1■■□□□ 1.29
SMIM4-204ENST00000482728 BICC1Q9H694 974 aaKnown RBP23.1■■□□□ 1.29
SMIM4-204ENST00000482728 HDAC5Q9UQL6 1122 aa23.1■■□□□ 1.29
SMIM4-204ENST00000482728 IQCA1LA6NCM1 817 aa23.09■■□□□ 1.29
SMIM4-204ENST00000482728 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
SMIM4-204ENST00000482728 ZKSCAN2Q63HK3 967 aa23.09■■□□□ 1.29
SMIM4-204ENST00000482728 GPR101Q96P66 508 aaPredicted RBP23.09■■□□□ 1.29
SMIM4-204ENST00000482728 TRIM27P14373 513 aa23.08■■□□□ 1.29
SMIM4-204ENST00000482728 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.29
SMIM4-204ENST00000482728 L3MBTL3Q96JM7 780 aaPredicted RBP23.08■■□□□ 1.29
SMIM4-204ENST00000482728 COL4A5P29400 1685 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 POTECB2RU33 542 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 CXCL9Q07325 125 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 TNIP1Q15025 636 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 DOK7Q18PE1 504 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 LDHAL6AQ6ZMR3 332 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 ZNF594Q96JF6 807 aaPredicted RBP23.07■■□□□ 1.28
SMIM4-204ENST00000482728 CNNM1Q9NRU3 951 aa23.07■■□□□ 1.28
SMIM4-204ENST00000482728 RAD17O75943 681 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 KCNJ4P48050 445 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 RABL6Q3YEC7 729 aaPredicted RBP23.06■■□□□ 1.28
SMIM4-204ENST00000482728 CIAPIN1Q6FI81 312 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 RBM46Q8TBY0 533 aaKnown RBP23.06■■□□□ 1.28
SMIM4-204ENST00000482728 DBNDD1Q9H9R9 158 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 HACL1Q9UJ83 578 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 LEMD3Q9Y2U8 911 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 DUOX1Q9NRD9 1551 aa23.06■■□□□ 1.28
SMIM4-204ENST00000482728 LMOD1P29536 600 aaPredicted RBP23.05■■□□□ 1.28
SMIM4-204ENST00000482728 CHRNDQ07001 517 aa23.05■■□□□ 1.28
SMIM4-204ENST00000482728 ANKRD44Q8N8A2 993 aa23.05■■□□□ 1.28
SMIM4-204ENST00000482728 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
SMIM4-204ENST00000482728 ECE2O60344 883 aa23.04■■□□□ 1.28
SMIM4-204ENST00000482728 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
SMIM4-204ENST00000482728 GNAI3P08754 354 aa23.03■■□□□ 1.28
SMIM4-204ENST00000482728 HELBQ8NG08 1087 aaPredicted RBP23.03■■□□□ 1.28
SMIM4-204ENST00000482728 ZNF804BA4D1E1 1349 aa23.03■■□□□ 1.28
SMIM4-204ENST00000482728 WTIPA6NIX2 430 aaPredicted RBP23.02■■□□□ 1.28
SMIM4-204ENST00000482728 YDJCA8MPS7 323 aa23.02■■□□□ 1.28
SMIM4-204ENST00000482728 PLIN1O60240 522 aa23.02■■□□□ 1.28
SMIM4-204ENST00000482728 FTSJ3Q8IY81 847 aaKnown RBP23.02■■□□□ 1.28
SMIM4-204ENST00000482728 SMC1BQ8NDV3 1235 aa23.02■■□□□ 1.28
SMIM4-204ENST00000482728 MEIS3Q99687 375 aa23.02■■□□□ 1.28
SMIM4-204ENST00000482728 TAF1DQ9H5J8 278 aaPredicted RBP23.02■■□□□ 1.28
SMIM4-204ENST00000482728 TNNQ9UQP3 1299 aa23.02■■□□□ 1.28
SMIM4-204ENST00000482728 TAF5LO75529 589 aa23.01■■□□□ 1.27
SMIM4-204ENST00000482728 EPHX2P34913 555 aa23.01■■□□□ 1.27
SMIM4-204ENST00000482728 FSTL1Q12841 308 aa23.01■■□□□ 1.27
SMIM4-204ENST00000482728 LRRFIP2Q9Y608 721 aaKnown RBP23.01■■□□□ 1.27
SMIM4-204ENST00000482728 LTBP1Q14766 1721 aa23.01■■□□□ 1.27
SMIM4-204ENST00000482728 EAPPQ56P03 285 aaPredicted RBP23■■□□□ 1.27
SMIM4-204ENST00000482728 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
SMIM4-204ENST00000482728 GMPSP49915 693 aaPredicted RBP22.99■■□□□ 1.27
SMIM4-204ENST00000482728 PODNQ7Z5L7 613 aa22.99■■□□□ 1.27
SMIM4-204ENST00000482728 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
SMIM4-204ENST00000482728 TMEM57Q8N5G2 664 aa22.99■■□□□ 1.27
SMIM4-204ENST00000482728 KCNQ5Q9NR82 932 aa22.99■■□□□ 1.27
SMIM4-204ENST00000482728 MED23Q9ULK4 1368 aa22.99■■□□□ 1.27
SMIM4-204ENST00000482728 SCN4AP35499 1836 aa22.98■■□□□ 1.27
SMIM4-204ENST00000482728 PSMD14O00487 310 aa22.98■■□□□ 1.27
SMIM4-204ENST00000482728 SCNN1DP51172 638 aa22.98■■□□□ 1.27
SMIM4-204ENST00000482728 PUS3Q9BZE2 481 aaKnown RBP22.98■■□□□ 1.27
SMIM4-204ENST00000482728 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
SMIM4-204ENST00000482728 CLEC11AQ9Y240 323 aa22.98■■□□□ 1.27
SMIM4-204ENST00000482728 EPS15P42566 896 aa22.97■■□□□ 1.27
SMIM4-204ENST00000482728 YTHDC1Q96MU7 727 aaKnown RBP22.97■■□□□ 1.27
SMIM4-204ENST00000482728 GPRC5DQ9NZD1 345 aa22.97■■□□□ 1.27
SMIM4-204ENST00000482728 RIPOR2Q9Y4F9 1068 aa22.97■■□□□ 1.27
SMIM4-204ENST00000482728 MS4A1P11836 297 aa22.96■■□□□ 1.27
SMIM4-204ENST00000482728 KLHDC4Q8TBB5 520 aa22.96■■□□□ 1.27
SMIM4-204ENST00000482728 COA1Q9GZY4 146 aa22.96■■□□□ 1.27
SMIM4-204ENST00000482728 MROH5Q6ZUA9 1318 aa22.96■■□□□ 1.27
SMIM4-204ENST00000482728 SNAP23O00161 211 aa22.95■■□□□ 1.26
SMIM4-204ENST00000482728 GNAI2P04899 355 aa22.95■■□□□ 1.26
SMIM4-204ENST00000482728 METTL24Q5JXM2 366 aa22.95■■□□□ 1.26
SMIM4-204ENST00000482728 CHADLQ6NUI6 762 aa22.95■■□□□ 1.26
SMIM4-204ENST00000482728 TXNRD3Q86VQ6 643 aa22.95■■□□□ 1.26
SMIM4-204ENST00000482728 LDHDQ86WU2 507 aa22.95■■□□□ 1.26
SMIM4-204ENST00000482728 CNOT7Q9UIV1 285 aaKnown RBP22.95■■□□□ 1.26
SMIM4-204ENST00000482728 ZBTB12Q9Y330 459 aaPredicted RBP22.95■■□□□ 1.26
SMIM4-204ENST00000482728 H7C1D1 291 aa22.94■■□□□ 1.26
SMIM4-204ENST00000482728 HSPA6P17066 643 aa22.94■■□□□ 1.26
SMIM4-204ENST00000482728 RPS12P25398 132 aaKnown RBP22.94■■□□□ 1.26
SMIM4-204ENST00000482728 LRRC24Q50LG9 513 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms