RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NGLY1Q96IV0 654 aa10.18□□□□□ -0.78
CLK1-212ENST00000482590 IGFLR1Q9H665 355 aa10.18□□□□□ -0.78
CLK1-212ENST00000482590 SLC6A14Q9UN76 642 aa10.18□□□□□ -0.78
CLK1-212ENST00000482590 CDC42BPBQ9Y5S2 1711 aa10.18□□□□□ -0.78
CLK1-212ENST00000482590 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
CLK1-212ENST00000482590 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
CLK1-212ENST00000482590 SEC13P55735 322 aa10.17□□□□□ -0.78
CLK1-212ENST00000482590 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
CLK1-212ENST00000482590 TFIP11Q9UBB9 837 aaKnown RBP10.17□□□□□ -0.78
CLK1-212ENST00000482590 PREX2Q70Z35 1606 aa10.17□□□□□ -0.78
CLK1-212ENST00000482590 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
CLK1-212ENST00000482590 A0A0A0MRY4 1105 aa10.16□□□□□ -0.78
CLK1-212ENST00000482590 SELPP16109 830 aa10.16□□□□□ -0.78
CLK1-212ENST00000482590 HIF1AQ16665 826 aa10.16□□□□□ -0.78
CLK1-212ENST00000482590 GSX2Q9BZM3 304 aa10.16□□□□□ -0.78
CLK1-212ENST00000482590 MAFBQ9Y5Q3 323 aaPredicted RBP10.16□□□□□ -0.78
CLK1-212ENST00000482590 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
CLK1-212ENST00000482590 PREX1Q8TCU6 1659 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 ITSN2Q9NZM3 1697 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 LOC105371045A0A1W2PR82 267 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 NUDT8Q8WV74 236 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 GLMNQ92990 594 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 EFCC1Q9HA90 598 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 JPH1Q9HDC5 661 aaPredicted RBP10.15□□□□□ -0.78
CLK1-212ENST00000482590 CDC42BPAQ5VT25 1732 aa10.15□□□□□ -0.78
CLK1-212ENST00000482590 PLCH2O75038 1416 aa10.15□□□□□ -0.79
CLK1-212ENST00000482590 CLIP1P30622 1438 aa10.15□□□□□ -0.79
CLK1-212ENST00000482590 C9orf172C9J069 976 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 ELNP15502 786 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 ADGRE1Q14246 886 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 IER5Q5VY09 327 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 ARID3AQ99856 593 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 DNAJB12Q9NXW2 375 aaKnown RBP10.14□□□□□ -0.79
CLK1-212ENST00000482590 DMGDHQ9UI17 866 aaKnown RBP10.14□□□□□ -0.79
CLK1-212ENST00000482590 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 YEATS2Q9ULM3 1422 aa10.14□□□□□ -0.79
CLK1-212ENST00000482590 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
CLK1-212ENST00000482590 LMTK3Q96Q04 1460 aa10.13□□□□□ -0.79
CLK1-212ENST00000482590 PDIA4P13667 645 aaKnown RBP10.13□□□□□ -0.79
CLK1-212ENST00000482590 AFF1P51825 1210 aaKnown RBP10.13□□□□□ -0.79
CLK1-212ENST00000482590 MBTPS1Q14703 1052 aa10.13□□□□□ -0.79
CLK1-212ENST00000482590 RTN1Q16799 776 aa10.13□□□□□ -0.79
CLK1-212ENST00000482590 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
CLK1-212ENST00000482590 TROQ12816 1431 aaPredicted RBP10.13□□□□□ -0.79
CLK1-212ENST00000482590 SCAPERQ9BY12 1400 aa10.13□□□□□ -0.79
CLK1-212ENST00000482590 KDM5CP41229 1560 aa10.13□□□□□ -0.79
CLK1-212ENST00000482590 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 TGFBR3LH3BV60 316 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 LGR5O75473 907 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
CLK1-212ENST00000482590 CCINQ13939 588 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 PRSS36Q5K4E3 855 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 PSAPL1Q6NUJ1 521 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 SHISA2Q6UWI4 295 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 ILDR2Q71H61 639 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
CLK1-212ENST00000482590 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.12□□□□□ -0.79
CLK1-212ENST00000482590 C9orf84Q5VXU9 1444 aa10.12□□□□□ -0.79
CLK1-212ENST00000482590 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 DIP2CQ9Y2E4 1556 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 NFKB1P19838 968 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
CLK1-212ENST00000482590 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
CLK1-212ENST00000482590 PNMA5Q96PV4 448 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 PSMG3-AS1Q96PY0 264 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 HINFPQ9BQA5 517 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
CLK1-212ENST00000482590 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
CLK1-212ENST00000482590 RAC1P63000 192 aa10.1□□□□□ -0.79
CLK1-212ENST00000482590 PTK7Q13308 1070 aa10.1□□□□□ -0.79
CLK1-212ENST00000482590 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
CLK1-212ENST00000482590 ABCC1P33527 1531 aa10.1□□□□□ -0.79
CLK1-212ENST00000482590 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
CLK1-212ENST00000482590 ARHGEF12Q9NZN5 1544 aa10.09□□□□□ -0.79
CLK1-212ENST00000482590 DPYDQ12882 1025 aa10.09□□□□□ -0.79
CLK1-212ENST00000482590 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
CLK1-212ENST00000482590 TXNRD3Q86VQ6 643 aa10.09□□□□□ -0.79
CLK1-212ENST00000482590 PROSER2Q86WR7 435 aaPredicted RBP10.09□□□□□ -0.79
CLK1-212ENST00000482590 ATP10AO60312 1499 aa10.09□□□□□ -0.79
CLK1-212ENST00000482590 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
CLK1-212ENST00000482590 H2AFB2P0C5Z0 115 aa10.08□□□□□ -0.8
CLK1-212ENST00000482590 IGFBP4P22692 258 aa10.08□□□□□ -0.8
CLK1-212ENST00000482590 EFCAB2Q5VUJ9 269 aa10.08□□□□□ -0.8
CLK1-212ENST00000482590 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
CLK1-212ENST00000482590 FMR1NBQ8N0W7 255 aaPredicted RBP10.08□□□□□ -0.8
CLK1-212ENST00000482590 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
CLK1-212ENST00000482590 C3P01024 1663 aa10.08□□□□□ -0.8
CLK1-212ENST00000482590 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
CLK1-212ENST00000482590 CASKIN1Q8WXD9 1431 aa10.07□□□□□ -0.8
CLK1-212ENST00000482590 KIDINS220Q9ULH0 1771 aa10.07□□□□□ -0.8
CLK1-212ENST00000482590 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
CLK1-212ENST00000482590 INPP5BP32019 993 aa10.07□□□□□ -0.8
CLK1-212ENST00000482590 NRG1Q02297 640 aaPredicted RBP10.07□□□□□ -0.8
CLK1-212ENST00000482590 MLECQ14165 292 aa10.07□□□□□ -0.8
CLK1-212ENST00000482590 KLK14Q9P0G3 267 aa10.07□□□□□ -0.8
CLK1-212ENST00000482590 ARTNQ5T4W7 220 aa10.06□□□□□ -0.8
CLK1-212ENST00000482590 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
CLK1-212ENST00000482590 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms