RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CCDC82Q8N4S0 544 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 GJB4Q9NTQ9 266 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 KCNA6P17658 529 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 RXRAP19793 462 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 SCRN1Q12765 414 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 GTF2F1P35269 517 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS52-218ENST00000482399 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
VPS52-218ENST00000482399 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 GOLGA8FQ08AF8 430 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 GOLGA8DPQ0D2H9 430 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 SKIDA1Q1XH10 827 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 UBXN4Q92575 508 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.04
VPS52-218ENST00000482399 VGLL3A8MV65 326 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 TAF5LO75529 589 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 CYP21A2P08686 494 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 C8orf76Q96K31 380 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 FEZ1Q99689 392 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 GPHNQ9NQX3 736 aaPredicted RBP14.82□□□□□ -0.04
VPS52-218ENST00000482399 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
VPS52-218ENST00000482399 SLC3A2P08195 630 aaKnown RBP14.82□□□□□ -0.04
VPS52-218ENST00000482399 LMBR1LQ6UX01 489 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 ZSCAN16Q9H4T2 348 aaPredicted RBP14.82□□□□□ -0.04
VPS52-218ENST00000482399 HMG20BQ9P0W2 317 aa14.82□□□□□ -0.04
VPS52-218ENST00000482399 ALDH1L1O75891 902 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 SLU7O95391 586 aaKnown RBP14.81□□□□□ -0.04
VPS52-218ENST00000482399 MCMDC2Q4G0Z9 681 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 ARHGAP29Q52LW3 1261 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 NFATC2IPQ8NCF5 419 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 TDRD7Q8NHU6 1098 aaKnown RBP14.81□□□□□ -0.04
VPS52-218ENST00000482399 SIGLEC1Q9BZZ2 1709 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 TNRQ92752 1358 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 KIF20AO95235 890 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 EPHA10Q5JZY3 1008 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
VPS52-218ENST00000482399 DBNLQ9UJU6 430 aaKnown RBP14.81□□□□□ -0.04
VPS52-218ENST00000482399 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
VPS52-218ENST00000482399 NFXL1Q6ZNB6 911 aa14.81□□□□□ -0.04
VPS52-218ENST00000482399 REREQ9P2R6 1566 aa14.8□□□□□ -0.04
VPS52-218ENST00000482399 GOLGA8BA8MQT2 603 aa14.8□□□□□ -0.04
VPS52-218ENST00000482399 ZNF397Q8NF99 534 aaPredicted RBP14.8□□□□□ -0.04
VPS52-218ENST00000482399 MRPS27Q92552 414 aaKnown RBP14.8□□□□□ -0.04
VPS52-218ENST00000482399 XPO4Q9C0E2 1151 aaKnown RBP14.8□□□□□ -0.04
VPS52-218ENST00000482399 ORC3Q9UBD5 711 aaPredicted RBP14.8□□□□□ -0.04
VPS52-218ENST00000482399 TEX35Q5T0J7 233 aa14.8□□□□□ -0.04
VPS52-218ENST00000482399 ANKRD13DQ6ZTN6 518 aa14.8□□□□□ -0.04
VPS52-218ENST00000482399 GOLPH3LQ9H4A5 285 aa14.8□□□□□ -0.04
VPS52-218ENST00000482399 RNMTO43148 476 aaKnown RBP14.79□□□□□ -0.04
VPS52-218ENST00000482399 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
VPS52-218ENST00000482399 IFIT1P09914 478 aaKnown RBP14.79□□□□□ -0.04
VPS52-218ENST00000482399 FBXO38Q6PIJ6 1188 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 CTNNA3Q9UI47 895 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 A0A0G2JLW4 131 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 DPCR1Q3MIW9 517 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 UTP14CQ5TAP6 766 aaKnown RBP14.79□□□□□ -0.04
VPS52-218ENST00000482399 ZNF594Q96JF6 807 aaPredicted RBP14.79□□□□□ -0.04
VPS52-218ENST00000482399 MYO5BQ9ULV0 1848 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 CTAGE5O15320 804 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 FAM160A1Q05DH4 1040 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 RESTQ13127 1097 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 KMT5BQ4FZB7 885 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 DHX32Q7L7V1 743 aaKnown RBP14.79□□□□□ -0.04
VPS52-218ENST00000482399 PLA2G4DQ86XP0 818 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 ZBTB3Q9H5J0 574 aa14.79□□□□□ -0.04
VPS52-218ENST00000482399 KLF18A0A0U1RQI7 1052 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 TNNT3P45378 269 aaPredicted RBP14.78□□□□□ -0.04
VPS52-218ENST00000482399 TNNI3KQ59H18 835 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 ANKRD24Q8TF21 1146 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 FPGT-TNNI3KV9GXZ4 949 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 ELP1O95163 1332 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 CCDC66A2RUB6 948 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 ANKRD7Q92527 254 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 CCDC34Q96HJ3 373 aa14.78□□□□□ -0.04
VPS52-218ENST00000482399 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
VPS52-218ENST00000482399 ARGLU1Q9NWB6 273 aaPredicted RBP14.78□□□□□ -0.04
VPS52-218ENST00000482399 NDUFA8P51970 172 aa14.77□□□□□ -0.04
VPS52-218ENST00000482399 TRDNQ13061 729 aa14.77□□□□□ -0.04
VPS52-218ENST00000482399 SPECC1Q5M775 1068 aa14.77□□□□□ -0.04
VPS52-218ENST00000482399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.77□□□□□ -0.04
VPS52-218ENST00000482399 CPLX3Q8WVH0 158 aa14.77□□□□□ -0.04
VPS52-218ENST00000482399 NOL10Q9BSC4 688 aaKnown RBP14.77□□□□□ -0.04
VPS52-218ENST00000482399 ADCY9O60503 1353 aa14.77□□□□□ -0.04
VPS52-218ENST00000482399 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.04
VPS52-218ENST00000482399 TMCO3Q6UWJ1 677 aa14.77□□□□□ -0.04
VPS52-218ENST00000482399 PCDHA7Q9UN72 937 aa14.77□□□□□ -0.05
VPS52-218ENST00000482399 KIF20BQ96Q89 1820 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 CEP170BQ9Y4F5 1589 aaPredicted RBP14.76□□□□□ -0.05
VPS52-218ENST00000482399 PES1O00541 588 aaKnown RBP14.76□□□□□ -0.05
VPS52-218ENST00000482399 NEMFO60524 1076 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 CHMP4CQ96CF2 233 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 EPC1Q9H2F5 836 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 PDIA4P13667 645 aaKnown RBP14.76□□□□□ -0.05
VPS52-218ENST00000482399 UBASH3AP57075 661 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 OLFM4Q6UX06 510 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 MICU3Q86XE3 530 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 IP6K1Q92551 441 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
VPS52-218ENST00000482399 CLIC4Q9Y696 253 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms