RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
C9orf3-218ENST00000482056 TMEM94Q12767 1356 aa18.14■□□□□ 0.49
C9orf3-218ENST00000482056 LIG1P18858 919 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 FOXO4P98177 505 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 TYRO3Q06418 890 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 NOLC1Q14978 699 aaKnown RBP eCLIP18.13■□□□□ 0.49
C9orf3-218ENST00000482056 CADPS2Q86UW7 1296 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 CABLES1Q8TDN4 633 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 GLI3P10071 1580 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 PRKCSHP14314 528 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-218ENST00000482056 FAM173BQ6P4H8 233 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 BRF1Q92994 677 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 CLSTN2Q9H4D0 955 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 DACT1Q9NYF0 836 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 TFIP11Q9UBB9 837 aaKnown RBP18.13■□□□□ 0.49
C9orf3-218ENST00000482056 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
C9orf3-218ENST00000482056 SPEF2Q9C093 1822 aa18.12■□□□□ 0.49
C9orf3-218ENST00000482056 HMGN5P82970 282 aaKnown RBP18.12■□□□□ 0.49
C9orf3-218ENST00000482056 LRRFIP1Q32MZ4 808 aaKnown RBP18.12■□□□□ 0.49
C9orf3-218ENST00000482056 DHX32Q7L7V1 743 aaKnown RBP18.12■□□□□ 0.49
C9orf3-218ENST00000482056 MTERF4Q7Z6M4 381 aaKnown RBP18.12■□□□□ 0.49
C9orf3-218ENST00000482056 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
C9orf3-218ENST00000482056 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
C9orf3-218ENST00000482056 SEC62Q99442 399 aaKnown RBP18.12■□□□□ 0.49
C9orf3-218ENST00000482056 NDUFB9Q9Y6M9 179 aa18.12■□□□□ 0.49
C9orf3-218ENST00000482056 NUP188Q5SRE5 1749 aa18.12■□□□□ 0.49
C9orf3-218ENST00000482056 GOLIM4O00461 696 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 JAK2O60674 1132 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 PFKFB2O60825 505 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 RESTQ13127 1097 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 CCDC191Q8NCU4 936 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 PRIMPOLQ96LW4 560 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 ZNF830Q96NB3 372 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-218ENST00000482056 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-218ENST00000482056 ERVV-2B6SEH9 535 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 CAMK4Q16566 473 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 SPATA31A3Q5VYP0 1347 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 ATG9AQ7Z3C6 839 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 MRVI1Q9Y6F6 885 aa18.11■□□□□ 0.49
C9orf3-218ENST00000482056 LAMA4Q16363 1823 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 CAVIN2O95810 425 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 ZMYM1Q5SVZ6 1142 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 NAA16Q6N069 864 aaPredicted RBP18.1■□□□□ 0.49
C9orf3-218ENST00000482056 MPNDQ8N594 471 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 SPTLC3Q9NUV7 552 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 UBR2Q8IWV8 1755 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 EYA2O00167 538 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 CIAO1O76071 339 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
C9orf3-218ENST00000482056 RBM43Q6ZSC3 357 aaKnown RBP18.1■□□□□ 0.49
C9orf3-218ENST00000482056 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
C9orf3-218ENST00000482056 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
C9orf3-218ENST00000482056 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
C9orf3-218ENST00000482056 TJP1Q07157 1748 aa18.09■□□□□ 0.49
C9orf3-218ENST00000482056 IFIT1P09914 478 aaKnown RBP18.09■□□□□ 0.49
C9orf3-218ENST00000482056 SCRN1Q12765 414 aa18.09■□□□□ 0.49
C9orf3-218ENST00000482056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.09■□□□□ 0.49
C9orf3-218ENST00000482056 ATL3Q6DD88 541 aa18.08■□□□□ 0.49
C9orf3-218ENST00000482056 CKAP2LQ8IYA6 745 aa18.08■□□□□ 0.49
C9orf3-218ENST00000482056 DDX11Q96FC9 970 aa18.08■□□□□ 0.49
C9orf3-218ENST00000482056 FAM13BQ9NYF5 915 aa18.08■□□□□ 0.49
C9orf3-218ENST00000482056 MYH15Q9Y2K3 1946 aa18.08■□□□□ 0.48
C9orf3-218ENST00000482056 RNF113AO15541 343 aaKnown RBP18.08■□□□□ 0.48
C9orf3-218ENST00000482056 ANO6Q4KMQ2 910 aa18.08■□□□□ 0.48
C9orf3-218ENST00000482056 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
C9orf3-218ENST00000482056 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
C9orf3-218ENST00000482056 MYRIPQ8NFW9 859 aa18.07■□□□□ 0.48
C9orf3-218ENST00000482056 WDR17Q8IZU2 1322 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 CTAGE5O15320 804 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 AP5Z1O43299 807 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 TIMM10P62072 90 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 RBM10P98175 930 aaKnown RBP18.06■□□□□ 0.48
C9orf3-218ENST00000482056 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
C9orf3-218ENST00000482056 ZNF396Q96N95 335 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-218ENST00000482056 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 CBX8Q9HC52 389 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 PTPDC1A2A3K4 754 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 NR1I2O75469 434 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 CHGBP05060 677 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 SPC24Q8NBT2 197 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 NSUN7Q8NE18 718 aaKnown RBP18.06■□□□□ 0.48
C9orf3-218ENST00000482056 PGBD1Q96JS3 809 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
C9orf3-218ENST00000482056 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 A0A1B0GUL7 405 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 E7EWF7 191 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 HSPD1P10809 573 aaKnown RBP18.05■□□□□ 0.48
C9orf3-218ENST00000482056 APOBRQ0VD83 1088 aa18.05■□□□□ 0.48
C9orf3-218ENST00000482056 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-218ENST00000482056 LUZP1Q86V48 1076 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms