RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
CCDC78-211ENST00000481804 MED23Q9ULK4 1368 aa16.8■□□□□ 0.28
CCDC78-211ENST00000481804 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
CCDC78-211ENST00000481804 ZNF397Q8NF99 534 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-211ENST00000481804 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-211ENST00000481804 SEC62Q99442 399 aaKnown RBP16.8■□□□□ 0.28
CCDC78-211ENST00000481804 SCRN1Q12765 414 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 KRT222Q8N1A0 295 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 FMNL2Q96PY5 1086 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-211ENST00000481804 SMC2O95347 1197 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 ELF2Q15723 593 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
CCDC78-211ENST00000481804 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
CCDC78-211ENST00000481804 NRDCO43847 1150 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 GABPB1Q06547 395 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-211ENST00000481804 SARM1Q6SZW1 724 aa16.79■□□□□ 0.28
CCDC78-211ENST00000481804 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 PTPDC1A2A3K4 754 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 CHGBP05060 677 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 CYP21A2P08686 494 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 KCNA6P17658 529 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 APOBRQ0VD83 1088 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
CCDC78-211ENST00000481804 TSGA10IPQ3SY00 556 aa16.77■□□□□ 0.28
CCDC78-211ENST00000481804 MYD88Q99836 296 aa16.77■□□□□ 0.28
CCDC78-211ENST00000481804 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
CCDC78-211ENST00000481804 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.28
CCDC78-211ENST00000481804 PIK3C2AO00443 1686 aa16.77■□□□□ 0.28
CCDC78-211ENST00000481804 FAM160A1Q05DH4 1040 aa16.77■□□□□ 0.28
CCDC78-211ENST00000481804 SNRKQ9NRH2 765 aa16.77■□□□□ 0.28
CCDC78-211ENST00000481804 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.27
CCDC78-211ENST00000481804 TBX22Q9Y458 520 aa16.77■□□□□ 0.27
CCDC78-211ENST00000481804 NWD1Q149M9 1564 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 SLU7O95391 586 aaKnown RBP16.76■□□□□ 0.27
CCDC78-211ENST00000481804 TFCP2Q12800 502 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 KMT5BQ4FZB7 885 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
CCDC78-211ENST00000481804 ERO1AQ96HE7 468 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCDC78-211ENST00000481804 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
CCDC78-211ENST00000481804 GSDMDP57764 484 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
CCDC78-211ENST00000481804 PSME1Q06323 249 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 SNW1Q13573 536 aaKnown RBP16.76■□□□□ 0.27
CCDC78-211ENST00000481804 RCOR1Q9UKL0 485 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
CCDC78-211ENST00000481804 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 SYTL4Q96C24 671 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-211ENST00000481804 DIP2AQ14689 1571 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 NAA16Q6N069 864 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-211ENST00000481804 NSUN7Q8NE18 718 aaKnown RBP16.75■□□□□ 0.27
CCDC78-211ENST00000481804 NEUROD6Q96NK8 337 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 CRYBG1Q9Y4K1 1723 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 ATP5JP18859 108 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 TNNI3KQ59H18 835 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 FPGT-TNNI3KV9GXZ4 949 aa16.75■□□□□ 0.27
CCDC78-211ENST00000481804 KIF2AO00139 706 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 TPM4P67936 248 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 CCZ1BP86790 482 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 CCZ1P86791 482 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 STK38Q15208 465 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 FBXO38Q6PIJ6 1188 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 TMC6Q7Z403 805 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 DHX40Q8IX18 779 aaKnown RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 DBNDD2Q9BQY9 259 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 A0A1B0GVL5 298 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 BIN1O00499 593 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 IGKV5-2P06315 115 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 EPHA10Q5JZY3 1008 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 NYAP1Q6ZVC0 841 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 PFKFB2O60825 505 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 SFPQP23246 707 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 XAGE3Q8WTP9 111 aa16.74■□□□□ 0.27
CCDC78-211ENST00000481804 MRPS27Q92552 414 aaKnown RBP16.74■□□□□ 0.27
CCDC78-211ENST00000481804 ERICH4A6NGS2 130 aa16.73■□□□□ 0.27
CCDC78-211ENST00000481804 NEURL1BA8MQ27 555 aa16.73■□□□□ 0.27
CCDC78-211ENST00000481804 GCKRQ14397 625 aa16.73■□□□□ 0.27
CCDC78-211ENST00000481804 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
CCDC78-211ENST00000481804 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
CCDC78-211ENST00000481804 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
CCDC78-211ENST00000481804 SYT10Q6XYQ8 523 aa16.72■□□□□ 0.27
CCDC78-211ENST00000481804 IFNKQ9P0W0 207 aa16.72■□□□□ 0.27
CCDC78-211ENST00000481804 GOLIM4O00461 696 aa16.72■□□□□ 0.27
CCDC78-211ENST00000481804 PIP4K2AP48426 406 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-211ENST00000481804 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
CCDC78-211ENST00000481804 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms