RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PDPK1O15530 556 aa10.28□□□□□ -0.76
LSM5-210ENST00000480956 C14orf80Q86SX3 495 aa10.28□□□□□ -0.76
LSM5-210ENST00000480956 CACTIN-AS1Q8N1I8 211 aa10.28□□□□□ -0.76
LSM5-210ENST00000480956 CHAC2Q8WUX2 184 aa10.28□□□□□ -0.76
LSM5-210ENST00000480956 RBSNQ9H1K0 784 aa10.28□□□□□ -0.76
LSM5-210ENST00000480956 ADAMTS1Q9UHI8 967 aa10.28□□□□□ -0.76
LSM5-210ENST00000480956 MYCP01106 439 aaPredicted RBP10.27□□□□□ -0.76
LSM5-210ENST00000480956 PDGFAP04085 211 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 USP17L7P0C7H9 530 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 RASGRF1Q13972 1273 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 COL9A2Q14055 689 aaPredicted RBP10.27□□□□□ -0.76
LSM5-210ENST00000480956 MYBPC2Q14324 1141 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 MAPRE1Q15691 268 aaKnown RBP10.27□□□□□ -0.76
LSM5-210ENST00000480956 TNNI3KQ59H18 835 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 INO80BQ9C086 356 aaPredicted RBP10.27□□□□□ -0.76
LSM5-210ENST00000480956 NRBP1Q9UHY1 535 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 MCM8Q9UJA3 840 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 INTUQ9ULD6 942 aa10.27□□□□□ -0.76
LSM5-210ENST00000480956 A0A1W2PRU2 124 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 SHTN1A0MZ66 631 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 BACH1O14867 736 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
LSM5-210ENST00000480956 CCNYL3P0C7X3 344 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 POU3F3P20264 500 aaPredicted RBP10.27□□□□□ -0.77
LSM5-210ENST00000480956 SCUBE3Q8IX30 993 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 CELF2-AS1Q8N7Q2 184 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 ZHX3Q9H4I2 956 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 ENAMQ9NRM1 1142 aa10.27□□□□□ -0.77
LSM5-210ENST00000480956 TMEM229AB2RXF0 380 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 CPNE3O75131 537 aaKnown RBP10.26□□□□□ -0.77
LSM5-210ENST00000480956 AXDND1Q5T1B0 1012 aaPredicted RBP10.26□□□□□ -0.77
LSM5-210ENST00000480956 EFCAB2Q5VUJ9 269 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 KSR2Q6VAB6 950 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 EVA1BQ9NVM1 165 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 LRFN2Q9ULH4 789 aa10.26□□□□□ -0.77
LSM5-210ENST00000480956 ASMTLO95671 621 aa10.25□□□□□ -0.77
LSM5-210ENST00000480956 MCL1Q07820 350 aa10.25□□□□□ -0.77
LSM5-210ENST00000480956 DDR2Q16832 855 aa10.25□□□□□ -0.77
LSM5-210ENST00000480956 CT47A1Q5JQC4 288 aaPredicted RBP10.25□□□□□ -0.77
LSM5-210ENST00000480956 SH3BP5LQ7L8J4 393 aa10.25□□□□□ -0.77
LSM5-210ENST00000480956 THAP3Q8WTV1 239 aaPredicted RBP10.25□□□□□ -0.77
LSM5-210ENST00000480956 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.25□□□□□ -0.77
LSM5-210ENST00000480956 CD2APQ9Y5K6 639 aa10.25□□□□□ -0.77
LSM5-210ENST00000480956 WASLO00401 505 aaPredicted RBP10.24□□□□□ -0.77
LSM5-210ENST00000480956 SMAD7O15105 426 aaKnown RBP10.24□□□□□ -0.77
LSM5-210ENST00000480956 TBX3O15119 743 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 TLL1O43897 1013 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 PWP1Q13610 501 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 SLC4A10Q6U841 1118 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 PI16Q6UXB8 463 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 PDILTQ8N807 584 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 SVIPQ8NHG7 77 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 RUNDC1Q96C34 613 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 EAF1Q96JC9 268 aaPredicted RBP10.24□□□□□ -0.77
LSM5-210ENST00000480956 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 WASHC2CQ9Y4E1 1318 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 ZPR1O75312 459 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 RASGRP1O95267 797 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 PCSK2P16519 638 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 STAT3P40763 770 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 RSRP1Q9BUV0 290 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 ST7Q9NRC1 585 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 LZTS1Q9Y250 596 aa10.24□□□□□ -0.77
LSM5-210ENST00000480956 MAGEB6P1A0A0J9YX57 407 aa10.23□□□□□ -0.77
LSM5-210ENST00000480956 COL6A1P12109 1028 aa10.23□□□□□ -0.77
LSM5-210ENST00000480956 NFKB2Q00653 900 aa10.23□□□□□ -0.77
LSM5-210ENST00000480956 CHPFQ8IZ52 775 aa10.23□□□□□ -0.77
LSM5-210ENST00000480956 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.23□□□□□ -0.77
LSM5-210ENST00000480956 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
LSM5-210ENST00000480956 ANP32CO43423 234 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 EIF4A3P38919 411 aaKnown RBP10.22□□□□□ -0.77
LSM5-210ENST00000480956 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 GRAMD1BQ3KR37 738 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 MTERF2Q49AM1 385 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 THNSL2Q86YJ6 484 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 TTC8Q8TAM2 541 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 MYO19Q96H55 970 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 C2orf49Q9BVC5 232 aaPredicted RBP10.22□□□□□ -0.77
LSM5-210ENST00000480956 SRRTQ9BXP5 876 aaKnown RBP10.22□□□□□ -0.77
LSM5-210ENST00000480956 PPCSQ9HAB8 311 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 IL21Q9HBE4 155 aa10.22□□□□□ -0.77
LSM5-210ENST00000480956 TRIM37O94972 964 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 RAB27AP51159 221 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 EPHA4P54764 986 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 INO80DQ53TQ3 878 aaPredicted RBP10.21□□□□□ -0.77
LSM5-210ENST00000480956 L1TD1Q5T7N2 865 aaKnown RBP10.21□□□□□ -0.77
LSM5-210ENST00000480956 BRICD5Q6PL45 260 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 RELL1Q8IUW5 271 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 SRCIN1Q9C0H9 1055 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 CAAP1Q9H8G2 361 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 ZIM2Q9NZV7 527 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 MAPK8IP1Q9UQF2 711 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 SALL2Q9Y467 1007 aaPredicted RBP10.21□□□□□ -0.77
LSM5-210ENST00000480956 PTCH2Q9Y6C5 1203 aa10.21□□□□□ -0.77
LSM5-210ENST00000480956 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms