RNA–Protein interactions for RNA: ENST00000480884.5

CCDC66-217, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-217ENST00000480884 CBX2Q14781 532 aaPredicted RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 SLC4A10Q6U841 1118 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 NGDNQ8NEJ9 315 aaKnown RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 GGNBP2Q9H3C7 697 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 TMX1Q9H3N1 280 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 NOB1Q9ULX3 412 aaKnown RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 PTCH2Q9Y6C5 1203 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 MINDY4BA8MYZ0 360 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 IRS4O14654 1257 aaPredicted RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 PDGFAP04085 211 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 USP17L7P0C7H9 530 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 CRKP46108 304 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 ST13P50502 369 aaKnown RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 SCNN1DP51172 638 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 HDAC1Q13547 482 aaPredicted RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 C2orf27AQ580R0 203 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 AXDND1Q5T1B0 1012 aaPredicted RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 ACBD5Q5T8D3 534 aaPredicted RBP4.95□□□□□ -1.62
CCDC66-217ENST00000480884 RNF20Q5VTR2 975 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 LHFPL2Q6ZUX7 228 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 EDEM1Q92611 657 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 CCDC113Q9H0I3 377 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 DAAM1Q9Y4D1 1078 aa4.95□□□□□ -1.62
CCDC66-217ENST00000480884 PRSS47A8MTI9 375 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 PDPK1O15530 556 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 RASSF7Q02833 373 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 DDR2Q16832 855 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 TM4SF20Q53R12 229 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 FAM83BQ5T0W9 1011 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 FBXL19Q6PCT2 694 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 RNF180Q86T96 592 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 PACS2Q86VP3 889 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 JMYQ8N9B5 988 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 MYRIPQ8NFW9 859 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 TIFAQ96CG3 184 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 NAP1L4Q99733 375 aaKnown RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 CARD14Q9BXL6 1004 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 CCDC8Q9H0W5 538 aaPredicted RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 UBP1Q9NZI7 540 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 PFDN2Q9UHV9 154 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 PPT2Q9UMR5 302 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 A6NJY4 79 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 PIP5K1CO60331 668 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 MYCLP1P12525 358 aaPredicted RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 VARSP26640 1264 aaKnown RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 TRAPPC10P48553 1259 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 RAPGEF1Q13905 1077 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 MAPRE1Q15691 268 aaKnown RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 LONRF1Q17RB8 773 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 IL31Q6EBC2 164 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 ALKBH2Q6NS38 261 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 SH3BP5LQ7L8J4 393 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 STRA8Q7Z7C7 330 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 SPICE1Q8N0Z3 855 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 ARHGAP9Q9BRR9 750 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 RBSNQ9H1K0 784 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 TNKS2Q9H2K2 1166 aa4.94□□□□□ -1.62
CCDC66-217ENST00000480884 SEPT9Q9UHD8 586 aaPredicted RBP4.94□□□□□ -1.62
CCDC66-217ENST00000480884 RPGRIP1LQ68CZ1 1315 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 DYTNA2CJ06 578 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 TRIM37O94972 964 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 SERPINB3P29508 390 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 MTMR1Q13613 665 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 NXPE4Q6UWF7 544 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 PPM1EQ8WY54 764 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 SECISBP2LQ93073 1101 aaKnown RBP4.93□□□□□ -1.62
CCDC66-217ENST00000480884 SMAD5Q99717 465 aaKnown RBP4.93□□□□□ -1.62
CCDC66-217ENST00000480884 MUC3BQ9H195 1237 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 BCL2L12Q9HB09 334 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 JADE2Q9NQC1 790 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 TPX2Q9ULW0 747 aaKnown RBP4.93□□□□□ -1.62
CCDC66-217ENST00000480884 MAPK8IP1Q9UQF2 711 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 PCDHB11Q9Y5F2 797 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 TNFRSF21O75509 655 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 NEK3P51956 506 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 NFKB2Q00653 900 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 PTPRNQ16849 979 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 GRAMD1BQ3KR37 738 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 SH3PXD2AQ5TCZ1 1133 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 SKAP1Q86WV1 359 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 IFNL3Q8IZI9 196 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 SDR16C5Q8N3Y7 309 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 ZNF296Q8WUU4 475 aaPredicted RBP4.93□□□□□ -1.62
CCDC66-217ENST00000480884 USB1Q9BQ65 265 aaKnown RBP4.93□□□□□ -1.62
CCDC66-217ENST00000480884 C2orf49Q9BVC5 232 aaPredicted RBP4.93□□□□□ -1.62
CCDC66-217ENST00000480884 TRIM8Q9BZR9 551 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 ZNF700Q9H0M5 742 aa4.93□□□□□ -1.62
CCDC66-217ENST00000480884 GUCY2FP51841 1108 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 USP4Q13107 963 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 RASGRF1Q13972 1273 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 KCTD2Q14681 263 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 ZRSR2Q15696 482 aaKnown RBP4.92□□□□□ -1.62
CCDC66-217ENST00000480884 ICE2Q659A1 982 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 DZIP3Q86Y13 1208 aaKnown RBP4.92□□□□□ -1.62
CCDC66-217ENST00000480884 CHPFQ8IZ52 775 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 CDH19Q9H159 772 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 KIAA1468Q9P260 1216 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 USP3Q9Y6I4 520 aa4.92□□□□□ -1.62
CCDC66-217ENST00000480884 F2P00734 622 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms