RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 LOC102724428A0A0B4J2F2 783 aa20.1■□□□□ 0.81
SH3D21-203ENST00000480549 SIK1P57059 783 aa20.1■□□□□ 0.81
SH3D21-203ENST00000480549 DNAJC2Q99543 621 aaKnown RBP20.1■□□□□ 0.81
SH3D21-203ENST00000480549 RBM8AQ9Y5S9 174 aaKnown RBP20.1■□□□□ 0.81
SH3D21-203ENST00000480549 SPEF2Q9C093 1822 aa20.1■□□□□ 0.81
SH3D21-203ENST00000480549 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 ITPK1Q13572 414 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
SH3D21-203ENST00000480549 ZNF589Q86UQ0 364 aaPredicted RBP20.09■□□□□ 0.81
SH3D21-203ENST00000480549 ZNF34Q8IZ26 560 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 CCDC85AQ96PX6 553 aaPredicted RBP20.09■□□□□ 0.81
SH3D21-203ENST00000480549 CCDC87Q9NVE4 849 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 A0A0G2JS52 829 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
SH3D21-203ENST00000480549 TTLL11Q8NHH1 800 aa20.09■□□□□ 0.81
SH3D21-203ENST00000480549 ADCK5Q3MIX3 580 aa20.08■□□□□ 0.81
SH3D21-203ENST00000480549 INTS4Q96HW7 963 aaKnown RBP20.08■□□□□ 0.81
SH3D21-203ENST00000480549 RIC1Q4ADV7 1423 aa20.08■□□□□ 0.81
SH3D21-203ENST00000480549 NASPP49321 788 aaPredicted RBP20.08■□□□□ 0.8
SH3D21-203ENST00000480549 CHGBP05060 677 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 IFIT5Q13325 482 aaKnown RBP20.07■□□□□ 0.8
SH3D21-203ENST00000480549 VPS72Q15906 364 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 FAM98CQ17RN3 349 aaKnown RBP20.07■□□□□ 0.8
SH3D21-203ENST00000480549 CREB3L3Q68CJ9 461 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 DDX46Q7L014 1031 aaKnown RBP20.07■□□□□ 0.8
SH3D21-203ENST00000480549 CCDC94Q9BW85 323 aaPredicted RBP20.07■□□□□ 0.8
SH3D21-203ENST00000480549 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 KCNQ2O43526 872 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 CTSWP56202 376 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 TM6SF1Q9BZW5 370 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 CEP126Q9P2H0 1117 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 KBTBD3Q8NAB2 608 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 ZNF830Q96NB3 372 aaPredicted RBP20.07■□□□□ 0.8
SH3D21-203ENST00000480549 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 GREM2Q9H772 168 aa20.07■□□□□ 0.8
SH3D21-203ENST00000480549 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
SH3D21-203ENST00000480549 IRS4O14654 1257 aaPredicted RBP20.06■□□□□ 0.8
SH3D21-203ENST00000480549 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
SH3D21-203ENST00000480549 AK2P54819 239 aa20.06■□□□□ 0.8
SH3D21-203ENST00000480549 TAF5LO75529 589 aa20.06■□□□□ 0.8
SH3D21-203ENST00000480549 BAG4O95429 457 aaKnown RBP20.06■□□□□ 0.8
SH3D21-203ENST00000480549 CPA1P15085 419 aa20.06■□□□□ 0.8
SH3D21-203ENST00000480549 ZSWIM6Q9HCJ5 1215 aa20.06■□□□□ 0.8
SH3D21-203ENST00000480549 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
SH3D21-203ENST00000480549 RPAP1Q9BWH6 1393 aaPredicted RBP20.06■□□□□ 0.8
SH3D21-203ENST00000480549 LRP5O75197 1615 aa20.06■□□□□ 0.8
SH3D21-203ENST00000480549 DYNC1I1O14576 645 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 CBX1P83916 185 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 SLC27A2O14975 620 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 JAKMIP1Q96N16 626 aaKnown RBP20.05■□□□□ 0.8
SH3D21-203ENST00000480549 PAG1Q9NWQ8 432 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 DDX60Q8IY21 1712 aaKnown RBP20.05■□□□□ 0.8
SH3D21-203ENST00000480549 ITGA6P23229 1130 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 RUFY3Q7L099 469 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
SH3D21-203ENST00000480549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.04■□□□□ 0.8
SH3D21-203ENST00000480549 PPP1R9BQ96SB3 815 aa20.04■□□□□ 0.8
SH3D21-203ENST00000480549 RIPOR2Q9Y4F9 1068 aa20.04■□□□□ 0.8
SH3D21-203ENST00000480549 LAMB2P55268 1798 aa20.04■□□□□ 0.8
SH3D21-203ENST00000480549 GOLIM4O00461 696 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 PDE8AO60658 829 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 FNBP4Q8N3X1 1017 aaPredicted RBP20.03■□□□□ 0.8
SH3D21-203ENST00000480549 SEC62Q99442 399 aaKnown RBP20.03■□□□□ 0.8
SH3D21-203ENST00000480549 AKAP2Q9Y2D5 859 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 ZKSCAN1P17029 563 aaPredicted RBP20.03■□□□□ 0.8
SH3D21-203ENST00000480549 ADORA1P30542 326 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 USPL1Q5W0Q7 1092 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 SH3TC1Q8TE82 1336 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 THSD7AQ9UPZ6 1657 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 KCNJ4P48050 445 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 VPS53Q5VIR6 699 aa20.03■□□□□ 0.8
SH3D21-203ENST00000480549 SMARCC1Q92922 1105 aaPredicted RBP20.03■□□□□ 0.8
SH3D21-203ENST00000480549 IFIT1P09914 478 aaKnown RBP20.02■□□□□ 0.8
SH3D21-203ENST00000480549 TICAM2Q86XR7 235 aa20.02■□□□□ 0.8
SH3D21-203ENST00000480549 XAGE2Q96GT9 111 aa20.02■□□□□ 0.8
SH3D21-203ENST00000480549 MCMDC2Q4G0Z9 681 aa20.02■□□□□ 0.8
SH3D21-203ENST00000480549 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.8
SH3D21-203ENST00000480549 TAF6LQ9Y6J9 622 aa20.02■□□□□ 0.8
SH3D21-203ENST00000480549 ANKRD18BA2A2Z9 1011 aa20.01■□□□□ 0.79
SH3D21-203ENST00000480549 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
SH3D21-203ENST00000480549 CCDC129Q6ZRS4 1044 aa20.01■□□□□ 0.79
SH3D21-203ENST00000480549 COL9A3Q14050 684 aaPredicted RBP20.01■□□□□ 0.79
SH3D21-203ENST00000480549 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
SH3D21-203ENST00000480549 PTMSP20962 102 aa20.01■□□□□ 0.79
SH3D21-203ENST00000480549 PDRG1Q9NUG6 133 aa20.01■□□□□ 0.79
SH3D21-203ENST00000480549 TSGA10IPQ3SY00 556 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 LDHAL6AQ6ZMR3 332 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 VGLL2Q8N8G2 317 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 LARP6Q9BRS8 491 aaKnown RBP20■□□□□ 0.79
SH3D21-203ENST00000480549 AKAP11Q9UKA4 1901 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 ZBTB22O15209 634 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 AK7Q96M32 723 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 ARAP2Q8WZ64 1704 aa20■□□□□ 0.79
SH3D21-203ENST00000480549 BRD1O95696 1058 aa19.99■□□□□ 0.79
SH3D21-203ENST00000480549 MAPK8IP2Q13387 824 aaPredicted RBP19.99■□□□□ 0.79
SH3D21-203ENST00000480549 SLFNL1Q499Z3 407 aa19.99■□□□□ 0.79
SH3D21-203ENST00000480549 RNF20Q5VTR2 975 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms