RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	PTMA	P06454	111 aa	Known RBP	10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	HLF	Q16534	295 aa		10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	STK31	Q9BXU1	1019 aa		10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	ZNF652	Q9Y2D9	606 aa		10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	CHML	P26374	656 aa		10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	HMGN5	P82970	282 aa	Known RBP	10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	BICDL1	Q6ZP65	573 aa		10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	PRIMPOL	Q96LW4	560 aa		10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
SH3YL1-222	ENST00000479739	ANXA1	P04083	346 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ATP8B2	P98198	1209 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	GPR162	Q16538	588 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	SETDB2	Q96T68	719 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ATP6V1D	Q9Y5K8	247 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ARFGEF1	Q9Y6D6	1849 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	TCHH	Q07283	1943 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ANKRD36C	Q5JPF3	1778 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	COL11A2	P13942	1736 aa	Predicted RBP	10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739		A0A0G2JLW4	131 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	DPEP1	P16444	411 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	HDGFL1	Q5TGJ6	251 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	PRR5L	Q6MZQ0	368 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	NECTIN2	Q92692	538 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ANO2	Q9NQ90	1003 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CHPF2	Q9P2E5	772 aa		10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.89	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CCDC183	Q5T5S1	534 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	KIF6	Q6ZMV9	814 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	FAM13B	Q9NYF5	915 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	RAB11FIP3	O75154	756 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	HSPA4	P34932	840 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CCDC30	Q5VVM6	783 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	SLC4A10	Q6U841	1118 aa		10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	DBF4	Q9UBU7	674 aa	Predicted RBP	10.88	□□□□□ -0.67
SH3YL1-222	ENST00000479739	TRIM6-TRIM34	B2RNG4	842 aa		10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	GRIN3B	O60391	1043 aa		10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	TPM3	P06753	285 aa		10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	COPS6	Q7L5N1	327 aa		10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	PIBF1	Q8WXW3	757 aa		10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ZBTB3	Q9H5J0	574 aa		10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CHRNA5	P30532	468 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ZNF34	Q8IZ26	560 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CNBD1	Q8NA66	436 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	MYRIP	Q8NFW9	859 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	XAGE3	Q8WTP9	111 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	RILPL2	Q969X0	211 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	BRIP1	Q9BX63	1249 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	EXOC6B	Q9Y2D4	811 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	UBN2	Q6ZU65	1347 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	UBE2H	P62256	183 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	USP48	Q86UV5	1035 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	RNF214	Q8ND24	703 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ARFGEF2	Q9Y6D5	1785 aa		10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.86	□□□□□ -0.67
SH3YL1-222	ENST00000479739	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	HYPK	Q9NX55	129 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	PIM2	Q9P1W9	311 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	PRDM4	Q9UKN5	801 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	WWC3	Q9ULE0	1092 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	PALD1	Q9ULE6	856 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	FLII	Q13045	1269 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CCDC24	Q8N4L8	307 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	CHMP4A	Q9BY43	222 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	RAD50	Q92878	1312 aa		10.85	□□□□□ -0.67
SH3YL1-222	ENST00000479739	RIC1	Q4ADV7	1423 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	KLRG2	A4D1S0	409 aa	Predicted RBP	10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ST5	P78524	1137 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	AIMP1	Q12904	312 aa	Known RBP	10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	TPTE2	Q6XPS3	522 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	G2E3	Q7L622	706 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739		F6X3S4	739 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	ZSCAN22	P10073	491 aa	Predicted RBP	10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	PDE6B	P35913	854 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	FKBP5	Q13451	457 aa	Predicted RBP	10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	BCS1L	Q9Y276	419 aa		10.84	□□□□□ -0.67
SH3YL1-222	ENST00000479739	NTSR2	O95665	410 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	GPT	P24298	496 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	DALRD3	Q5D0E6	543 aa	Known RBP	10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	SUSD4	Q5VX71	490 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	C2CD5	Q86YS7	1000 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	PLBD2	Q8NHP8	589 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	SSH3	Q8TE77	659 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	PHAX	Q9H814	394 aa	Known RBP	10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	ABCC12	Q96J65	1359 aa		10.83	□□□□□ -0.68
SH3YL1-222	ENST00000479739	PNMA6E	A0A0J9YXQ4	647 aa		10.82	□□□□□ -0.68
SH3YL1-222	ENST00000479739		H0YIN7	160 aa		10.82	□□□□□ -0.68
SH3YL1-222	ENST00000479739	YY1	P25490	414 aa		10.82	□□□□□ -0.68
SH3YL1-222	ENST00000479739	TCIRG1	Q13488	830 aa		10.82	□□□□□ -0.68
SH3YL1-222	ENST00000479739	PARP10	Q53GL7	1025 aa		10.82	□□□□□ -0.68

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