RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
DDX56-211ENST00000479602 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
DDX56-211ENST00000479602 API5Q9BZZ5 524 aaKnown RBP11.31□□□□□ -0.6
DDX56-211ENST00000479602 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
DDX56-211ENST00000479602 KCNQ5Q9NR82 932 aa11.31□□□□□ -0.6
DDX56-211ENST00000479602 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
DDX56-211ENST00000479602 IPO8O15397 1037 aaKnown RBP11.3□□□□□ -0.6
DDX56-211ENST00000479602 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 GPSM2P81274 684 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 CCDC191Q8NCU4 936 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
DDX56-211ENST00000479602 METTL22Q9BUU2 404 aaPredicted RBP11.3□□□□□ -0.6
DDX56-211ENST00000479602 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
DDX56-211ENST00000479602 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 COL4A1P02462 1669 aa11.3□□□□□ -0.6
DDX56-211ENST00000479602 RTL9Q8NET4 1388 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
DDX56-211ENST00000479602 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
DDX56-211ENST00000479602 MS4A1P11836 297 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
DDX56-211ENST00000479602 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 CYP4F22Q6NT55 531 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 CDC37L1Q7L3B6 337 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 DNAAF4Q8WXU2 420 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 GLIS2Q9BZE0 524 aaPredicted RBP11.29□□□□□ -0.6
DDX56-211ENST00000479602 RCAN3Q9UKA8 241 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
DDX56-211ENST00000479602 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
DDX56-211ENST00000479602 UTYO14607 1347 aa11.29□□□□□ -0.6
DDX56-211ENST00000479602 PI4KAP2A4QPH2 592 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 PSMD14O00487 310 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 CAPN15O75808 1086 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 EGFRP00533 1210 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 PCCAP05165 728 aaPredicted RBP11.28□□□□□ -0.6
DDX56-211ENST00000479602 ECE1P42892 770 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 PI4KAP1Q8N8J0 262 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 SEC31BQ9NQW1 1179 aa11.28□□□□□ -0.6
DDX56-211ENST00000479602 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
DDX56-211ENST00000479602 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
DDX56-211ENST00000479602 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
DDX56-211ENST00000479602 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
DDX56-211ENST00000479602 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 BEND3Q5T5X7 828 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 INTS3Q68E01 1043 aaKnown RBP11.27□□□□□ -0.61
DDX56-211ENST00000479602 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 G2E3Q7L622 706 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 GMLQ99445 158 aa11.27□□□□□ -0.61
DDX56-211ENST00000479602 LRRC37AA6NMS7 1700 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 TAF1P21675 1872 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 H7C1D1 291 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 AOC2O75106 756 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 IGKV5-2P06315 115 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 CCT4P50991 539 aaKnown RBP11.26□□□□□ -0.61
DDX56-211ENST00000479602 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
DDX56-211ENST00000479602 ZKSCAN2Q63HK3 967 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.26□□□□□ -0.61
DDX56-211ENST00000479602 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 PLA2G12BQ9BX93 195 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 DBNDD1Q9H9R9 158 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 MAP3K2Q9Y2U5 619 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
DDX56-211ENST00000479602 ZNF609O15014 1411 aa11.26□□□□□ -0.61
DDX56-211ENST00000479602 MYH3P11055 1940 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 NEURL1BA8MQ27 555 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 FAM155AB1AL88 458 aaPredicted RBP11.25□□□□□ -0.61
DDX56-211ENST00000479602 ECE2O60344 883 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 PDE8AO60658 829 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 TRIM27P14373 513 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 RGS19P49795 217 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
DDX56-211ENST00000479602 USP48Q86UV5 1035 aa11.25□□□□□ -0.61
DDX56-211ENST00000479602 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
DDX56-211ENST00000479602 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 CASP7P55210 303 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 AAMPQ13685 434 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 ABHD8Q96I13 439 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 EYA3Q99504 573 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 MYD88Q99836 296 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 CWC25Q9NXE8 425 aaPredicted RBP11.24□□□□□ -0.61
DDX56-211ENST00000479602 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
DDX56-211ENST00000479602 H7C1W4 665 aa11.23□□□□□ -0.61
DDX56-211ENST00000479602 CA12O43570 354 aa11.23□□□□□ -0.61
DDX56-211ENST00000479602 BCAR3O75815 825 aa11.23□□□□□ -0.61
DDX56-211ENST00000479602 GCKRQ14397 625 aa11.23□□□□□ -0.61
DDX56-211ENST00000479602 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
DDX56-211ENST00000479602 ZC3H12CQ9C0D7 883 aaKnown RBP11.23□□□□□ -0.61
DDX56-211ENST00000479602 SRCIN1Q9C0H9 1055 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms