RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
COL20A1-206ENST00000479501 UBXN4Q92575 508 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
COL20A1-206ENST00000479501 ZNF287Q9HBT7 754 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
COL20A1-206ENST00000479501 IRS4O14654 1257 aaPredicted RBP16.61■□□□□ 0.25
COL20A1-206ENST00000479501 RDXP35241 583 aaKnown RBP16.61■□□□□ 0.25
COL20A1-206ENST00000479501 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
COL20A1-206ENST00000479501 CAVIN2O95810 425 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 ABCA6Q8N139 1617 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
COL20A1-206ENST00000479501 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 OFD1O75665 1012 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL20A1-206ENST00000479501 HSPA4P34932 840 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 A0A1B0GUL7 405 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 ZBTB43O43298 467 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 STX1AQ16623 288 aa16.6■□□□□ 0.25
COL20A1-206ENST00000479501 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL20A1-206ENST00000479501 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
COL20A1-206ENST00000479501 PRC1O43663 620 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 EPS15P42566 896 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
COL20A1-206ENST00000479501 SLC26A6Q9BXS9 759 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 IQSEC3Q9UPP2 1182 aaPredicted RBP16.59■□□□□ 0.25
COL20A1-206ENST00000479501 BIN1O00499 593 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 BTG4Q9NY30 223 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 DYNC1I1O14576 645 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 LMTK2Q8IWU2 1503 aa16.59■□□□□ 0.25
COL20A1-206ENST00000479501 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
COL20A1-206ENST00000479501 NEURL1BA8MQ27 555 aa16.58■□□□□ 0.25
COL20A1-206ENST00000479501 SLC27A2O14975 620 aa16.58■□□□□ 0.25
COL20A1-206ENST00000479501 PTPN14Q15678 1187 aa16.58■□□□□ 0.25
COL20A1-206ENST00000479501 APOBRQ0VD83 1088 aa16.58■□□□□ 0.25
COL20A1-206ENST00000479501 ANKRD18AQ8IVF6 992 aa16.58■□□□□ 0.25
COL20A1-206ENST00000479501 ZNF444Q8N0Y2 327 aaPredicted RBP16.58■□□□□ 0.25
COL20A1-206ENST00000479501 ERLIN1O75477 346 aa16.58■□□□□ 0.24
COL20A1-206ENST00000479501 RBM5P52756 815 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL20A1-206ENST00000479501 PHKG2P15735 406 aa16.58■□□□□ 0.24
COL20A1-206ENST00000479501 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
COL20A1-206ENST00000479501 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
COL20A1-206ENST00000479501 LAMC1P11047 1609 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 KRT18P05783 430 aaKnown RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 CYP7A1P22680 504 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 SETBP1Q9Y6X0 1596 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 FAM200AQ8TCP9 573 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 ZNHIT6Q9NWK9 470 aaKnown RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 WTAPQ15007 396 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 KRT23Q9C075 422 aa16.57■□□□□ 0.24
COL20A1-206ENST00000479501 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
COL20A1-206ENST00000479501 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 TMCO3Q6UWJ1 677 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 KCNG4Q8TDN1 519 aa16.56■□□□□ 0.24
COL20A1-206ENST00000479501 ZNF594Q96JF6 807 aaPredicted RBP16.56■□□□□ 0.24
COL20A1-206ENST00000479501 RPGRQ92834 1020 aaKnown RBP16.56■□□□□ 0.24
COL20A1-206ENST00000479501 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
COL20A1-206ENST00000479501 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 PTPDC1A2A3K4 754 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 NLRP5P59047 1200 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 KIF18AQ8NI77 898 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 KDRP35968 1356 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 KIF2AO00139 706 aaPredicted RBP16.55■□□□□ 0.24
COL20A1-206ENST00000479501 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 STAP2Q9UGK3 403 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
COL20A1-206ENST00000479501 LDHCP07864 332 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
COL20A1-206ENST00000479501 ANO6Q4KMQ2 910 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
COL20A1-206ENST00000479501 PDE4BQ07343 736 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 ESR2Q92731 530 aa16.54■□□□□ 0.24
COL20A1-206ENST00000479501 PTCH1Q13635 1447 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms