RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 CHSY3Q70JA7 882 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
CCDC58-204ENST00000479414 MLLT1Q03111 559 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-204ENST00000479414 ORC1Q13415 861 aa9.64□□□□□ -0.87
CCDC58-204ENST00000479414 COL13A1Q5TAT6 717 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-204ENST00000479414 FAM35AQ86V20 835 aa9.64□□□□□ -0.87
CCDC58-204ENST00000479414 NSUN5Q96P11 429 aaKnown RBP9.64□□□□□ -0.87
CCDC58-204ENST00000479414 DNAJC25Q9H1X3 360 aa9.64□□□□□ -0.87
CCDC58-204ENST00000479414 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
CCDC58-204ENST00000479414 EREGO14944 169 aa9.63□□□□□ -0.87
CCDC58-204ENST00000479414 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
CCDC58-204ENST00000479414 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC58-204ENST00000479414 FRRS1LQ9P0K9 344 aa9.63□□□□□ -0.87
CCDC58-204ENST00000479414 ANKRD33BA6NCL7 494 aa9.62□□□□□ -0.87
CCDC58-204ENST00000479414 CPNE3O75131 537 aaKnown RBP9.62□□□□□ -0.87
CCDC58-204ENST00000479414 C20orf204Q6ZNR8 217 aa9.62□□□□□ -0.87
CCDC58-204ENST00000479414 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
CCDC58-204ENST00000479414 KANSL3Q9P2N6 904 aa9.62□□□□□ -0.87
CCDC58-204ENST00000479414 AMOTL2Q9Y2J4 779 aa9.62□□□□□ -0.87
CCDC58-204ENST00000479414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-204ENST00000479414 J3QW42 95 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 EIF1AYO14602 144 aaKnown RBP9.61□□□□□ -0.87
CCDC58-204ENST00000479414 CPB1P15086 417 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 HOXB4P17483 251 aaPredicted RBP9.61□□□□□ -0.87
CCDC58-204ENST00000479414 ERCC3P19447 782 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 AMPD1P23109 780 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 COL19A1Q14993 1142 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 HFE2Q6ZVN8 426 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 CEP120Q8N960 986 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 CSRNP1Q96S65 589 aa9.61□□□□□ -0.87
CCDC58-204ENST00000479414 GHRHP01286 108 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 ALBP02768 609 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 EIF2AK2P19525 551 aaKnown RBP9.6□□□□□ -0.87
CCDC58-204ENST00000479414 PSAPL1Q6NUJ1 521 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 NCAPG2Q86XI2 1143 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 NPAS4Q8IUM7 802 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 TTC9Q92623 222 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 PRDM6Q9NQX0 595 aa9.6□□□□□ -0.87
CCDC58-204ENST00000479414 EDN3P14138 238 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 DGKGP49619 791 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
CCDC58-204ENST00000479414 ENOX2Q16206 610 aaKnown RBP9.59□□□□□ -0.87
CCDC58-204ENST00000479414 USPL1Q5W0Q7 1092 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 ELMSAN1Q6PJG2 1045 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 GALNT12Q8IXK2 581 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 SPACA7Q96KW9 195 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 RBSNQ9H1K0 784 aa9.59□□□□□ -0.87
CCDC58-204ENST00000479414 PLD4Q96BZ4 506 aa9.58□□□□□ -0.88
CCDC58-204ENST00000479414 ADAMTS8Q9UP79 889 aa9.58□□□□□ -0.88
CCDC58-204ENST00000479414 M0R082 166 aa9.57□□□□□ -0.88
CCDC58-204ENST00000479414 RGS9O75916 674 aaPredicted RBP9.57□□□□□ -0.88
CCDC58-204ENST00000479414 POLR3DP05423 398 aaPredicted RBP9.57□□□□□ -0.88
CCDC58-204ENST00000479414 P4HBP07237 508 aaKnown RBP9.57□□□□□ -0.88
CCDC58-204ENST00000479414 ZNF417Q8TAU3 575 aa9.57□□□□□ -0.88
CCDC58-204ENST00000479414 ZNF587Q96SQ5 575 aaPredicted RBP9.57□□□□□ -0.88
CCDC58-204ENST00000479414 SMG9Q9H0W8 520 aaKnown RBP9.57□□□□□ -0.88
CCDC58-204ENST00000479414 PNMA6FA0A0J9YX94 578 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 PEAR1Q5VY43 1037 aaPredicted RBP9.56□□□□□ -0.88
CCDC58-204ENST00000479414 NUDT8Q8WV74 236 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 CCDC74AQ96AQ1 378 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 PBX4Q9BYU1 374 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 RRAGCQ9HB90 399 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 JPH1Q9HDC5 661 aaPredicted RBP9.56□□□□□ -0.88
CCDC58-204ENST00000479414 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
CCDC58-204ENST00000479414 LILRB5O75023 590 aa9.55□□□□□ -0.88
CCDC58-204ENST00000479414 ACPPP15309 386 aa9.55□□□□□ -0.88
CCDC58-204ENST00000479414 MAPK8P45983 427 aa9.55□□□□□ -0.88
CCDC58-204ENST00000479414 SNRPNP63162 240 aaKnown RBP9.55□□□□□ -0.88
CCDC58-204ENST00000479414 ATP11AP98196 1134 aa9.55□□□□□ -0.88
CCDC58-204ENST00000479414 COL9A3Q14050 684 aaPredicted RBP9.55□□□□□ -0.88
CCDC58-204ENST00000479414 LINC00114Q6XXX2 140 aa9.55□□□□□ -0.88
CCDC58-204ENST00000479414 RASSF4Q9H2L5 321 aa9.55□□□□□ -0.88
CCDC58-204ENST00000479414 NFKBIEO00221 500 aa9.54□□□□□ -0.88
CCDC58-204ENST00000479414 AFF1P51825 1210 aaKnown RBP9.54□□□□□ -0.88
CCDC58-204ENST00000479414 GRIK5Q16478 980 aa9.54□□□□□ -0.88
CCDC58-204ENST00000479414 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
CCDC58-204ENST00000479414 FBF1Q8TES7 1133 aa9.54□□□□□ -0.88
CCDC58-204ENST00000479414 LATS2Q9NRM7 1088 aa9.54□□□□□ -0.88
CCDC58-204ENST00000479414 A0A1W2PP55 124 aa9.53□□□□□ -0.88
CCDC58-204ENST00000479414 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC58-204ENST00000479414 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
CCDC58-204ENST00000479414 OSMRQ99650 979 aa9.53□□□□□ -0.88
CCDC58-204ENST00000479414 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
CCDC58-204ENST00000479414 NPHS2Q9NP85 383 aa9.53□□□□□ -0.88
CCDC58-204ENST00000479414 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
CCDC58-204ENST00000479414 NID1P14543 1247 aa9.52□□□□□ -0.89
CCDC58-204ENST00000479414 ATP2B2Q01814 1243 aa9.52□□□□□ -0.89
CCDC58-204ENST00000479414 EAPPQ56P03 285 aaPredicted RBP9.52□□□□□ -0.89
CCDC58-204ENST00000479414 ALG1LQ6GMV1 187 aa9.52□□□□□ -0.89
CCDC58-204ENST00000479414 FBXO33Q7Z6M2 555 aa9.52□□□□□ -0.89
CCDC58-204ENST00000479414 TMEM102Q8N9M5 508 aaPredicted RBP9.52□□□□□ -0.89
CCDC58-204ENST00000479414 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms