RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ERO1AQ96HE7 468 aa15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 RASSF4Q9H2L5 321 aa15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 C4AP0C0L4 1744 aa15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 YBX3P16989 372 aaKnown RBP eCLIP15.56■□□□□ 0.083e-6■■■■□ 19.7
CNKSR3-204ENST00000479339 BRD2P25440 801 aaKnown RBP15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 HNRNPH2P55795 449 aaKnown RBP15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 TXLNBQ8N3L3 684 aa15.56■□□□□ 0.08
CNKSR3-204ENST00000479339 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 CCDC171Q6TFL3 1326 aa15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 ERC2O15083 957 aa15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 TEX35Q5T0J7 233 aa15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 FOXD4L5Q5VV16 416 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 FOXD4L4Q8WXT5 416 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 ZNF496Q96IT1 587 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 C16orf45Q96MC5 204 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 GRIN3BO60391 1043 aa15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 AXDND1Q5T1B0 1012 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 RTF1Q92541 710 aaKnown RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 IFT57Q9NWB7 429 aa15.55■□□□□ 0.08
CNKSR3-204ENST00000479339 STARD3NLO95772 234 aa15.54■□□□□ 0.08
CNKSR3-204ENST00000479339 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.54■□□□□ 0.08
CNKSR3-204ENST00000479339 ZBTB1Q9Y2K1 713 aa15.54■□□□□ 0.08
CNKSR3-204ENST00000479339 RAD50Q92878 1312 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 ANAPC15P60006 121 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 C10orf71Q711Q0 1435 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 CCDC192P0DO97 292 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 PTGS1P23219 599 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 MCCP23508 829 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 PLCB2Q00722 1185 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 CEP135Q66GS9 1140 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
CNKSR3-204ENST00000479339 CLGNO14967 610 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 NEK4P51957 841 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 MCM10Q7L590 875 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 SIRT2Q8IXJ6 389 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 SPC24Q8NBT2 197 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 BRMS1Q9HCU9 246 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 ATP6V1DQ9Y5K8 247 aa15.52■□□□□ 0.08
CNKSR3-204ENST00000479339 COL15A1P39059 1388 aa15.52■□□□□ 0.07
CNKSR3-204ENST00000479339 KIF13BQ9NQT8 1826 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 AP5Z1O43299 807 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 ZPR1O75312 459 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 TGFB2P61812 414 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 FBXO38Q6PIJ6 1188 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 FAM200AQ8TCP9 573 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 IL17RAQ96F46 866 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 DCTPP1Q9H773 170 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 NARFQ9UHQ1 456 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 CHD4Q14839 1912 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 ABCC4O15439 1325 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 KCNQ3O43525 872 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 TM4SF1P30408 202 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 TPM4P67936 248 aa15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 TPD52L1Q16890 204 aaPredicted RBP15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
CNKSR3-204ENST00000479339 KIF2AO00139 706 aaPredicted RBP15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 NEMFO60524 1076 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 SDSP20132 328 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 DDR1Q08345 913 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 USPL1Q5W0Q7 1092 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 CWC15Q9P013 229 aaKnown RBP15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 RSPH14Q9UHP6 348 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 PXDNLA1KZ92 1463 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 A0A087WZG4 1122 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 SMARCA5O60264 1052 aaPredicted RBP15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 DCTN1Q14203 1278 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 NFE2L2Q16236 605 aa15.5■□□□□ 0.07
CNKSR3-204ENST00000479339 ZSCAN25Q6NSZ9 544 aa15.49■□□□□ 0.07
CNKSR3-204ENST00000479339 ZNF784Q8NCA9 323 aaPredicted RBP15.49■□□□□ 0.07
CNKSR3-204ENST00000479339 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 SLU7O95391 586 aaKnown RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 GPS2Q13227 327 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 GDPD2Q9HCC8 539 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 ZNF215Q9UL58 517 aaPredicted RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 H2AFXP16104 143 aaPredicted RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 CASQ1P31415 396 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 GTF2A1P52655 376 aaPredicted RBP15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 SRCIN1Q9C0H9 1055 aa15.48■□□□□ 0.07
CNKSR3-204ENST00000479339 DHX16O60231 1041 aaKnown RBP15.47■□□□□ 0.07
CNKSR3-204ENST00000479339 CDC25BP30305 580 aa15.47■□□□□ 0.07
CNKSR3-204ENST00000479339 IL6STP40189 918 aaPredicted RBP15.47■□□□□ 0.07
CNKSR3-204ENST00000479339 ICE2Q659A1 982 aa15.47■□□□□ 0.07
CNKSR3-204ENST00000479339 GOLGA6L1Q8N7Z2 621 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms