RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 NEK4P51957 841 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 NBR1Q14596 966 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 NECTIN1Q15223 517 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 METTL24Q5JXM2 366 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 PTF1AQ7RTS3 328 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 TM6SF1Q9BZW5 370 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
RAD51B-208ENST00000479335 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
RAD51B-208ENST00000479335 MED23Q9ULK4 1368 aa11.87□□□□□ -0.51
RAD51B-208ENST00000479335 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
RAD51B-208ENST00000479335 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 VGLL2Q8N8G2 317 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 FAM227BQ96M60 508 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
RAD51B-208ENST00000479335 NYXQ9GZU5 481 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 HELLSQ9NRZ9 838 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 SNX14Q9Y5W7 946 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
RAD51B-208ENST00000479335 RIC1Q4ADV7 1423 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 LRP5O75197 1615 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 TAF1LQ8IZX4 1826 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
RAD51B-208ENST00000479335 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
RAD51B-208ENST00000479335 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
RAD51B-208ENST00000479335 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
RAD51B-208ENST00000479335 A0A0D9SFI3 127 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 ZPR1O75312 459 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
RAD51B-208ENST00000479335 SSFA2P28290 1259 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 PTH1RQ03431 593 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 MCMDC2Q4G0Z9 681 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 LPIN2Q92539 896 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 HMG20BQ9P0W2 317 aa11.85□□□□□ -0.51
RAD51B-208ENST00000479335 GNPATO15228 680 aa11.84□□□□□ -0.51
RAD51B-208ENST00000479335 TAF5LO75529 589 aa11.84□□□□□ -0.51
RAD51B-208ENST00000479335 FGFR2P21802 821 aa11.84□□□□□ -0.51
RAD51B-208ENST00000479335 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
RAD51B-208ENST00000479335 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
RAD51B-208ENST00000479335 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
RAD51B-208ENST00000479335 EDC3Q96F86 508 aaKnown RBP11.84□□□□□ -0.51
RAD51B-208ENST00000479335 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
RAD51B-208ENST00000479335 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
RAD51B-208ENST00000479335 RBM8AQ9Y5S9 174 aaKnown RBP11.84□□□□□ -0.51
RAD51B-208ENST00000479335 GOLIM4O00461 696 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 UQCRFS1P1P0C7P4 283 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 PSMA5P28066 241 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 CUL4AQ13619 759 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 PUM3Q15397 648 aaKnown RBP11.83□□□□□ -0.52
RAD51B-208ENST00000479335 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
RAD51B-208ENST00000479335 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 INTS4Q96HW7 963 aaKnown RBP11.83□□□□□ -0.52
RAD51B-208ENST00000479335 SETDB2Q96T68 719 aa11.83□□□□□ -0.52
RAD51B-208ENST00000479335 C4BP0C0L5 1744 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 FAM177BA6PVY3 158 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ADORA1P30542 326 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 KCNJ4P48050 445 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 KCNQ4P56696 695 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 NUCB2P80303 420 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 TTF1Q15361 905 aaPredicted RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 TBC1D9BQ66K14 1250 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 CREB3L3Q68CJ9 461 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 TPTE2Q6XPS3 522 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ALDH8A1Q9H2A2 487 aaPredicted RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 SLC5A1P13866 664 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 KRT32Q14532 448 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 RAB3GAP1Q15042 981 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 VPS53Q5VIR6 699 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
RAD51B-208ENST00000479335 TMX3Q96JJ7 454 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 TTC14Q96N46 770 aa11.82□□□□□ -0.52
RAD51B-208ENST00000479335 SLC27A2O14975 620 aa11.81□□□□□ -0.52
RAD51B-208ENST00000479335 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
RAD51B-208ENST00000479335 GTF2E1P29083 439 aaPredicted RBP11.81□□□□□ -0.52
RAD51B-208ENST00000479335 RFC4P35249 363 aa11.81□□□□□ -0.52
RAD51B-208ENST00000479335 ZNF589Q86UQ0 364 aaPredicted RBP11.81□□□□□ -0.52
RAD51B-208ENST00000479335 DSCC1Q9BVC3 393 aa11.81□□□□□ -0.52
RAD51B-208ENST00000479335 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms