RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 MS4A1P11836 297 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 WASHC4Q2M389 1173 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-217ENST00000479161 L3MBTL3Q96JM7 780 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-217ENST00000479161 BICC1Q9H694 974 aaKnown RBP19.43■□□□□ 0.7
C9orf3-217ENST00000479161 ANKIB1Q9P2G1 1089 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 LEMD3Q9Y2U8 911 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 SCN4AP35499 1836 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
C9orf3-217ENST00000479161 SLC51AQ86UW1 340 aa19.42■□□□□ 0.7
C9orf3-217ENST00000479161 NIM1KQ8IY84 436 aa19.42■□□□□ 0.7
C9orf3-217ENST00000479161 GPC2Q8N158 579 aa19.42■□□□□ 0.7
C9orf3-217ENST00000479161 ANKRD44Q8N8A2 993 aa19.42■□□□□ 0.7
C9orf3-217ENST00000479161 ZNRF3Q9ULT6 936 aa19.42■□□□□ 0.7
C9orf3-217ENST00000479161 COL4A5P29400 1685 aa19.42■□□□□ 0.7
C9orf3-217ENST00000479161 KIF3CO14782 793 aa19.41■□□□□ 0.7
C9orf3-217ENST00000479161 VEGFAP15692 232 aaPredicted RBP19.41■□□□□ 0.7
C9orf3-217ENST00000479161 EIF6P56537 245 aaKnown RBP19.41■□□□□ 0.7
C9orf3-217ENST00000479161 AOC3Q16853 763 aa19.41■□□□□ 0.7
C9orf3-217ENST00000479161 RCAN3Q9UKA8 241 aa19.41■□□□□ 0.7
C9orf3-217ENST00000479161 C6orf229H3BNL8 230 aa19.4■□□□□ 0.7
C9orf3-217ENST00000479161 DZIP1LQ8IYY4 767 aaKnown RBP19.4■□□□□ 0.7
C9orf3-217ENST00000479161 ZC3H12CQ9C0D7 883 aaKnown RBP19.4■□□□□ 0.7
C9orf3-217ENST00000479161 FBXO3Q9UK99 471 aa19.4■□□□□ 0.7
C9orf3-217ENST00000479161 LDHAL6AQ6ZMR3 332 aa19.39■□□□□ 0.69
C9orf3-217ENST00000479161 C15orf52Q6ZUT6 534 aaKnown RBP19.39■□□□□ 0.69
C9orf3-217ENST00000479161 CHMP3Q9Y3E7 222 aa19.39■□□□□ 0.69
C9orf3-217ENST00000479161 MED23Q9ULK4 1368 aa19.39■□□□□ 0.69
C9orf3-217ENST00000479161 A0A1B0GUL6 1792 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 IQCA1LA6NCM1 817 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 UFL1O94874 794 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 MTX1Q13505 466 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 TAF7LQ5H9L4 462 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 ZNF526Q8TF50 670 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-217ENST00000479161 MEIS3Q99687 375 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 NMRK2Q9NPI5 230 aa19.38■□□□□ 0.69
C9orf3-217ENST00000479161 POTECB2RU33 542 aa19.37■□□□□ 0.69
C9orf3-217ENST00000479161 TOMM70O94826 608 aa19.37■□□□□ 0.69
C9orf3-217ENST00000479161 DDNO94850 711 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-217ENST00000479161 CHRNDQ07001 517 aa19.37■□□□□ 0.69
C9orf3-217ENST00000479161 FTSJ3Q8IY81 847 aaKnown RBP19.37■□□□□ 0.69
C9orf3-217ENST00000479161 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
C9orf3-217ENST00000479161 RIPOR2Q9Y4F9 1068 aa19.37■□□□□ 0.69
C9orf3-217ENST00000479161 PSME4Q14997 1843 aa19.37■□□□□ 0.69
C9orf3-217ENST00000479161 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
C9orf3-217ENST00000479161 TNIP1Q15025 636 aa19.36■□□□□ 0.69
C9orf3-217ENST00000479161 PODNQ7Z5L7 613 aa19.36■□□□□ 0.69
C9orf3-217ENST00000479161 CLUAP1Q96AJ1 413 aa19.36■□□□□ 0.69
C9orf3-217ENST00000479161 RRAGCQ9HB90 399 aa19.36■□□□□ 0.69
C9orf3-217ENST00000479161 ZNF804BA4D1E1 1349 aa19.35■□□□□ 0.69
C9orf3-217ENST00000479161 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
C9orf3-217ENST00000479161 RFX5P48382 616 aaPredicted RBP19.35■□□□□ 0.69
C9orf3-217ENST00000479161 CXCL9Q07325 125 aa19.35■□□□□ 0.69
C9orf3-217ENST00000479161 CNNM1Q9NRU3 951 aa19.35■□□□□ 0.69
C9orf3-217ENST00000479161 ZNF609O15014 1411 aa19.34■□□□□ 0.69
C9orf3-217ENST00000479161 GNAI2P04899 355 aa19.34■□□□□ 0.69
C9orf3-217ENST00000479161 CIAPIN1Q6FI81 312 aa19.34■□□□□ 0.69
C9orf3-217ENST00000479161 RBM46Q8TBY0 533 aaKnown RBP19.34■□□□□ 0.69
C9orf3-217ENST00000479161 ZNF594Q96JF6 807 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-217ENST00000479161 TNNQ9UQP3 1299 aa19.34■□□□□ 0.69
C9orf3-217ENST00000479161 LRRFIP2Q9Y608 721 aaKnown RBP19.34■□□□□ 0.69
C9orf3-217ENST00000479161 YDJCA8MPS7 323 aa19.33■□□□□ 0.68
C9orf3-217ENST00000479161 ZBTB7BO15156 539 aaPredicted RBP19.33■□□□□ 0.68
C9orf3-217ENST00000479161 PTPN12Q05209 780 aaKnown RBP19.33■□□□□ 0.68
C9orf3-217ENST00000479161 UBE4AQ14139 1066 aa19.33■□□□□ 0.68
C9orf3-217ENST00000479161 PDE3AQ14432 1141 aa19.33■□□□□ 0.68
C9orf3-217ENST00000479161 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.33■□□□□ 0.68
C9orf3-217ENST00000479161 COA1Q9GZY4 146 aa19.33■□□□□ 0.68
C9orf3-217ENST00000479161 IRS2Q9Y4H2 1338 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 SCN9AQ15858 1988 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 RIMBP2O15034 1052 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 ECE2O60344 883 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 CIAO1O76071 339 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 RLBP1P12271 317 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 DPF2Q92785 391 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 COPRSQ9NQ92 184 aa19.32■□□□□ 0.68
C9orf3-217ENST00000479161 EYA2O00167 538 aa19.31■□□□□ 0.68
C9orf3-217ENST00000479161 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
C9orf3-217ENST00000479161 FSTL1Q12841 308 aa19.31■□□□□ 0.68
C9orf3-217ENST00000479161 PNMA8AQ86V59 439 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-217ENST00000479161 C16orf71Q8IYS4 520 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-217ENST00000479161 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
C9orf3-217ENST00000479161 HACL1Q9UJ83 578 aa19.31■□□□□ 0.68
C9orf3-217ENST00000479161 G3V3G9 751 aa19.3■□□□□ 0.68
C9orf3-217ENST00000479161 VIL1P09327 827 aaKnown RBP19.3■□□□□ 0.68
C9orf3-217ENST00000479161 KCNJ4P48050 445 aa19.3■□□□□ 0.68
C9orf3-217ENST00000479161 MMP14P50281 582 aa19.3■□□□□ 0.68
C9orf3-217ENST00000479161 DCAF8Q5TAQ9 597 aa19.3■□□□□ 0.68
C9orf3-217ENST00000479161 VGLL2Q8N8G2 317 aa19.3■□□□□ 0.68
C9orf3-217ENST00000479161 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
C9orf3-217ENST00000479161 TAF1DQ9H5J8 278 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-217ENST00000479161 DBNDD1Q9H9R9 158 aa19.3■□□□□ 0.68
C9orf3-217ENST00000479161 PDE8BO95263 885 aa19.29■□□□□ 0.68
C9orf3-217ENST00000479161 SCNN1DP51172 638 aa19.29■□□□□ 0.68
C9orf3-217ENST00000479161 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
C9orf3-217ENST00000479161 GPRC5DQ9NZD1 345 aa19.29■□□□□ 0.68
C9orf3-217ENST00000479161 WTIPA6NIX2 430 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-217ENST00000479161 ZBTB22O15209 634 aa19.28■□□□□ 0.68
C9orf3-217ENST00000479161 TAF5LO75529 589 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms