RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 TBC1D32Q96NH3 1257 aa10.41□□□□□ -0.74
VPS45-208ENST00000478999 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
VPS45-208ENST00000478999 ZBTB7BO15156 539 aaPredicted RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 ALDH1B1P30837 517 aa10.4□□□□□ -0.74
VPS45-208ENST00000478999 INTS3Q68E01 1043 aaKnown RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 RPGRQ92834 1020 aaKnown RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 GLIS2Q9BZE0 524 aaPredicted RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 TMX4Q9H1E5 349 aaPredicted RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.74
VPS45-208ENST00000478999 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.74
VPS45-208ENST00000478999 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 GPTP24298 496 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 EIF4A1P60842 406 aaKnown RBP10.39□□□□□ -0.75
VPS45-208ENST00000478999 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
VPS45-208ENST00000478999 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 ZNF408Q9H9D4 720 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 ADARB2Q9NS39 739 aaKnown RBP10.39□□□□□ -0.75
VPS45-208ENST00000478999 GPRC5DQ9NZD1 345 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 MYH3P11055 1940 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 ABCC12Q96J65 1359 aa10.39□□□□□ -0.75
VPS45-208ENST00000478999 MAP3K15Q6ZN16 1313 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 SPEF2Q9C093 1822 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 RGL2O15211 777 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 NOGQ13253 232 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 HLFQ16534 295 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 BMP2KLQ5H9B9 411 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 CHD1LQ86WJ1 897 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 LARGE2Q8N3Y3 721 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 C8orf58Q8NAV2 365 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
VPS45-208ENST00000478999 DDX60Q8IY21 1712 aaKnown RBP10.38□□□□□ -0.75
VPS45-208ENST00000478999 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 ERVV-1B6SEH8 477 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 NBR1Q14596 966 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 CRY2Q49AN0 593 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 PPP1R42Q7Z4L9 355 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
VPS45-208ENST00000478999 TSPYL6Q8N831 410 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 PGAP2Q9UHJ9 254 aa10.37□□□□□ -0.75
VPS45-208ENST00000478999 RIC1Q4ADV7 1423 aa10.36□□□□□ -0.75
VPS45-208ENST00000478999 FAM155AB1AL88 458 aaPredicted RBP10.36□□□□□ -0.75
VPS45-208ENST00000478999 HIRAP54198 1017 aaPredicted RBP10.36□□□□□ -0.75
VPS45-208ENST00000478999 AIMP1Q12904 312 aaKnown RBP10.36□□□□□ -0.75
VPS45-208ENST00000478999 CC2D2BQ6DHV5 1058 aa10.36□□□□□ -0.75
VPS45-208ENST00000478999 TTLL7Q6ZT98 887 aa10.36□□□□□ -0.75
VPS45-208ENST00000478999 NIM1KQ8IY84 436 aa10.36□□□□□ -0.75
VPS45-208ENST00000478999 HUNKP57058 714 aa10.35□□□□□ -0.75
VPS45-208ENST00000478999 CXCL9Q07325 125 aa10.35□□□□□ -0.75
VPS45-208ENST00000478999 PARP10Q53GL7 1025 aa10.35□□□□□ -0.75
VPS45-208ENST00000478999 DLK2Q6UY11 383 aa10.35□□□□□ -0.75
VPS45-208ENST00000478999 RBM17Q96I25 401 aaKnown RBP10.35□□□□□ -0.75
VPS45-208ENST00000478999 SAGE1Q9NXZ1 904 aa10.35□□□□□ -0.75
VPS45-208ENST00000478999 PPIP5K2O43314 1243 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 HMMRO75330 724 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 TRPA1O75762 1119 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 DEKP35659 375 aaKnown RBP10.34□□□□□ -0.75
VPS45-208ENST00000478999 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
VPS45-208ENST00000478999 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
VPS45-208ENST00000478999 AOC3Q16853 763 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 HSP90AB3PQ58FF7 597 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 GIGYF2Q6Y7W6 1299 aaKnown RBP10.34□□□□□ -0.75
VPS45-208ENST00000478999 CTU1Q7Z7A3 348 aaKnown RBP10.34□□□□□ -0.75
VPS45-208ENST00000478999 TRPM4Q8TD43 1214 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 NLRP3Q96P20 1036 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 RNF186Q9NXI6 227 aa10.34□□□□□ -0.75
VPS45-208ENST00000478999 IBTKQ9P2D0 1353 aaPredicted RBP10.34□□□□□ -0.75
VPS45-208ENST00000478999 SHTN1A0MZ66 631 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 ANXA1P04083 346 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
VPS45-208ENST00000478999 RBM25P49756 843 aaKnown RBP10.33□□□□□ -0.76
VPS45-208ENST00000478999 KIF23Q02241 960 aaPredicted RBP10.33□□□□□ -0.76
VPS45-208ENST00000478999 CDC37L1Q7L3B6 337 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
VPS45-208ENST00000478999 C22orf23Q9BZE7 217 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 DCTPP1Q9H773 170 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
VPS45-208ENST00000478999 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
VPS45-208ENST00000478999 SEC24BO95487 1268 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 HOXB7P09629 217 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 NFKBIBQ15653 356 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 SUSD4Q5VX71 490 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 RGMBQ6NW40 437 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
VPS45-208ENST00000478999 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 UBN2Q6ZU65 1347 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 CDHR2Q9BYE9 1310 aa10.32□□□□□ -0.76
VPS45-208ENST00000478999 RBBP6Q7Z6E9 1792 aaKnown RBP10.31□□□□□ -0.76
VPS45-208ENST00000478999 MKI67P46013 3256 aaKnown RBP10.31□□□□□ -0.76
VPS45-208ENST00000478999 HABP4Q5JVS0 413 aaKnown RBP10.31□□□□□ -0.76
VPS45-208ENST00000478999 HDGFL1Q5TGJ6 251 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 COPS6Q7L5N1 327 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 XAGE3Q8WTP9 111 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 SNX21Q969T3 373 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms