RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 KSR2Q6VAB6 950 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 PGBD1Q96JS3 809 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 SEC62Q99442 399 aaKnown RBP12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 USP42Q9H9J4 1324 aaKnown RBP12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 GRM8O00222 908 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 TPM3P06753 285 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 TNNT1P13805 278 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 ARID5BQ14865 1188 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 BRF1Q92994 677 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 CLIP2Q9UDT6 1046 aa12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 FAM208AQ9UK61 1670 aaKnown RBP12.94□□□□□ -0.34
LRRFIP1-211ENST00000478958 AGLP35573 1532 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 SMTNL1A8MU46 457 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 TPD52L1Q16890 204 aaPredicted RBP12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 CEP120Q8N960 986 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 SATB1Q01826 763 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 SYT10Q6XYQ8 523 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
LRRFIP1-211ENST00000478958 MYO1CO00159 1063 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 TRIM66O15016 1216 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 ZNF75DP51815 510 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 MTX1Q13505 466 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 FILIP1Q7Z7B0 1213 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 CCDC144CPQ8IYA2 1237 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 CACTINQ8WUQ7 758 aaKnown RBP12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 PLEKHG1Q9ULL1 1385 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 GUCY1B3Q02153 619 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 DRC1Q96MC2 740 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
LRRFIP1-211ENST00000478958 ANKRD1Q15327 319 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 Q6ZUG5 572 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 KCNB2Q92953 911 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 CLSTN2Q9H4D0 955 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 GOLGA6L19H0YKK7 550 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 KMT5BQ4FZB7 885 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 CCDC112Q8NEF3 446 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 TRMT1Q9NXH9 659 aaKnown RBP12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 FAM53CQ9NYF3 392 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 HIP1O00291 1037 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 IP6K1Q92551 441 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
LRRFIP1-211ENST00000478958 ELP1O95163 1332 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 HOXB7P09629 217 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 NALCNQ8IZF0 1738 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 NPHP1O15259 732 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 TAF5LO75529 589 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 PSME1Q06323 249 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 C11orf57Q6ZUT1 292 aaPredicted RBP12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 TXLNBQ8N3L3 684 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
LRRFIP1-211ENST00000478958 USP27XA6NNY8 438 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 BECN2A8MW95 431 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 TEX35Q5T0J7 233 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 DIP2BQ9P265 1576 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 CHST3Q7LGC8 479 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 PLA2G4DQ86XP0 818 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 MYD88Q99836 296 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
LRRFIP1-211ENST00000478958 NWD1Q149M9 1564 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 GOLIM4O00461 696 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 GTF3C6Q969F1 213 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
LRRFIP1-211ENST00000478958 DDX58O95786 925 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms