RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PSAPL1Q6NUJ1 521 aa6.86□□□□□ -1.31
GPNMB-210ENST00000478451 FAM35AQ86V20 835 aa6.86□□□□□ -1.31
GPNMB-210ENST00000478451 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
GPNMB-210ENST00000478451 GPR152Q8TDT2 470 aa6.86□□□□□ -1.31
GPNMB-210ENST00000478451 GTF3C2Q8WUA4 911 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-210ENST00000478451 JPH1Q9HDC5 661 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-210ENST00000478451 SPDYE3A6NKU9 549 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 NID1P14543 1247 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 CPB1P15086 417 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 NRLP54845 237 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 NUDT8Q8WV74 236 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 TLR7Q9NYK1 1049 aaKnown RBP6.85□□□□□ -1.31
GPNMB-210ENST00000478451 MTMR7Q9Y216 660 aa6.85□□□□□ -1.31
GPNMB-210ENST00000478451 MMP20O60882 483 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 PSAPP07602 524 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 H2AFB2P0C5Z0 115 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 B4GALNT3Q6L9W6 998 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 NLRP13Q86W25 1043 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
GPNMB-210ENST00000478451 FNDC3AQ9Y2H6 1198 aaKnown RBP6.84□□□□□ -1.31
GPNMB-210ENST00000478451 RGS9O75916 674 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-210ENST00000478451 MPSTP25325 297 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 PLAURQ03405 335 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 MTMR3Q13615 1198 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 RETREG2Q8NC44 543 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 LPIN3Q9BQK8 851 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 FRRS1LQ9P0K9 344 aa6.83□□□□□ -1.32
GPNMB-210ENST00000478451 HOXD8P13378 290 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-210ENST00000478451 EIF2AK2P19525 551 aaKnown RBP6.82□□□□□ -1.32
GPNMB-210ENST00000478451 SOX18P35713 384 aa6.82□□□□□ -1.32
GPNMB-210ENST00000478451 AFF1P51825 1210 aaKnown RBP6.82□□□□□ -1.32
GPNMB-210ENST00000478451 NOM1Q5C9Z4 860 aaKnown RBP6.82□□□□□ -1.32
GPNMB-210ENST00000478451 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
GPNMB-210ENST00000478451 ELMSAN1Q6PJG2 1045 aa6.82□□□□□ -1.32
GPNMB-210ENST00000478451 HFE2Q6ZVN8 426 aa6.82□□□□□ -1.32
GPNMB-210ENST00000478451 NUDT16Q96DE0 195 aaKnown RBP6.82□□□□□ -1.32
GPNMB-210ENST00000478451 NSUN5Q96P11 429 aaKnown RBP6.82□□□□□ -1.32
GPNMB-210ENST00000478451 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
GPNMB-210ENST00000478451 EIF1AXP47813 144 aaKnown RBP6.81□□□□□ -1.32
GPNMB-210ENST00000478451 EDEM1Q92611 657 aa6.81□□□□□ -1.32
GPNMB-210ENST00000478451 APBA3O96018 575 aa6.8□□□□□ -1.32
GPNMB-210ENST00000478451 ABL1P00519 1130 aa6.8□□□□□ -1.32
GPNMB-210ENST00000478451 DNM1Q05193 864 aaKnown RBP6.8□□□□□ -1.32
GPNMB-210ENST00000478451 ZNF211Q13398 564 aaPredicted RBP6.8□□□□□ -1.32
GPNMB-210ENST00000478451 SF3B2Q13435 895 aaKnown RBP6.8□□□□□ -1.32
GPNMB-210ENST00000478451 TRAPPC3LQ5T215 181 aa6.8□□□□□ -1.32
GPNMB-210ENST00000478451 OR13H1Q8NG92 308 aa6.8□□□□□ -1.32
GPNMB-210ENST00000478451 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
GPNMB-210ENST00000478451 LOC102724428A0A0B4J2F2 783 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 J3QW42 95 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 GHRHP01286 108 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 PDGFAP04085 211 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
GPNMB-210ENST00000478451 PCSK2P16519 638 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 NPR3P17342 541 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 SIK1P57059 783 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 TRIM28Q13263 835 aaKnown RBP6.79□□□□□ -1.32
GPNMB-210ENST00000478451 GRIK5Q16478 980 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 TTC39BQ5VTQ0 682 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-210ENST00000478451 PDE12Q6L8Q7 609 aaKnown RBP6.79□□□□□ -1.32
GPNMB-210ENST00000478451 ALKBH2Q6NS38 261 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 TTC9Q92623 222 aa6.79□□□□□ -1.32
GPNMB-210ENST00000478451 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-210ENST00000478451 A0A0A0MRY4 1105 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 FAM13AO94988 1023 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 ELNP15502 786 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 MZF1P28698 734 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-210ENST00000478451 ZNF438Q7Z4V0 828 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 PLD4Q96BZ4 506 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 NACC1Q96RE7 527 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 ANO2Q9NQ90 1003 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 TMEM63CQ9P1W3 806 aa6.78□□□□□ -1.32
GPNMB-210ENST00000478451 SCRIBQ14160 1630 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 RAC1P63000 192 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 FKBP4Q02790 459 aaKnown RBP eCLIP6.77□□□□□ -1.33
GPNMB-210ENST00000478451 PDE4CQ08493 712 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 HYAL2Q12891 473 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 AAMPQ13685 434 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-210ENST00000478451 MSL1Q68DK7 614 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 DMRTC2Q8IXT2 367 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-210ENST00000478451 EGFL7Q9UHF1 273 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
GPNMB-210ENST00000478451 A6NHS1 94 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 SERPINB4P48594 390 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 C8orf34Q49A92 452 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 WFDC8Q8IUA0 241 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 TTC16Q8NEE8 873 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 GGNBP2Q9H3C7 697 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 NACADO15069 1562 aa6.76□□□□□ -1.33
GPNMB-210ENST00000478451 RB1CC1Q8TDY2 1594 aa6.75□□□□□ -1.33
GPNMB-210ENST00000478451 H3BRB1 525 aa6.75□□□□□ -1.33
GPNMB-210ENST00000478451 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-210ENST00000478451 GRIK4Q16099 956 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms