RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 FAM35AQ86V20 835 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 ZSCAN1Q8NBB4 408 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 MDFIQ99750 246 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 ZFYVE28Q9HCC9 887 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
SMARCA1-204ENST00000478420 EREGO14944 169 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 CPNE3O75131 537 aaKnown RBP6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 HFE2Q6ZVN8 426 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 NEDD1Q8NHV4 660 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 CSRNP1Q96S65 589 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 RBSNQ9H1K0 784 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 AMOTL2Q9Y2J4 779 aa6.91□□□□□ -1.3
SMARCA1-204ENST00000478420 SHISA8B8ZZ34 492 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 J3QW42 95 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 EIF1AYO14602 144 aaKnown RBP6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 GHRHP01286 108 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 CPB1P15086 417 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 MAPK8P45983 427 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 FMR1Q06787 632 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 KANK3Q6NY19 840 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 CHSY3Q70JA7 882 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 BTBD6Q96KE9 485 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 PODXL2Q9NZ53 605 aa6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 CCDC9Q9Y3X0 531 aaKnown RBP6.9□□□□□ -1.3
SMARCA1-204ENST00000478420 KIF4AO95239 1232 aa6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 EDN3P14138 238 aa6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 COL19A1Q14993 1142 aa6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 ELMSAN1Q6PJG2 1045 aa6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 NAGPAQ9UK23 515 aa6.89□□□□□ -1.31
SMARCA1-204ENST00000478420 PNMA6FA0A0J9YX94 578 aa6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 P4HBP07237 508 aaKnown RBP6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 ENOX2Q16206 610 aaKnown RBP6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 PSAPL1Q6NUJ1 521 aa6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
SMARCA1-204ENST00000478420 RGS9O75916 674 aaPredicted RBP6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 ARHGEF15O94989 841 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 POLR3DP05423 398 aaPredicted RBP6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 ATP2B2Q01814 1243 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 EAPPQ56P03 285 aaPredicted RBP6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 PERM1Q5SV97 790 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 USPL1Q5W0Q7 1092 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 CEP120Q8N960 986 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 CCDC74AQ96AQ1 378 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 FRRS1LQ9P0K9 344 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 STARD13Q9Y3M8 1113 aa6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.87□□□□□ -1.31
SMARCA1-204ENST00000478420 M0R082 166 aa6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 ALBP02768 609 aa6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 FGD1P98174 961 aa6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 NUDT8Q8WV74 236 aa6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 LPIN3Q9BQK8 851 aa6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 JPH1Q9HDC5 661 aaPredicted RBP6.86□□□□□ -1.31
SMARCA1-204ENST00000478420 LILRB5O75023 590 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 SMNDC1O75940 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 C20orf204Q6ZNR8 217 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 PBX4Q9BYU1 374 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 NPHS2Q9NP85 383 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 NLRP2Q9NX02 1062 aa6.85□□□□□ -1.31
SMARCA1-204ENST00000478420 FAM181BA6NEQ2 426 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 ATP11AP98196 1134 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 PEAR1Q5VY43 1037 aaPredicted RBP6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 CEP135Q66GS9 1140 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 TTC9Q92623 222 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 OSMRQ99650 979 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 LATS2Q9NRM7 1088 aa6.84□□□□□ -1.31
SMARCA1-204ENST00000478420 GADD45BO75293 160 aaPredicted RBP6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 ACPPP15309 386 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 DGKGP49619 791 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 PRDM6Q9NQX0 595 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 ADAMTS8Q9UP79 889 aa6.83□□□□□ -1.32
SMARCA1-204ENST00000478420 A0A1W2PP55 124 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 PIK3R2O00459 728 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 PRPF40AO75400 957 aaKnown RBP6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 TRPA1O75762 1119 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms