RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 POLLQ9UGP5 575 aa18.5■□□□□ 0.55
SMARCE1-209ENST00000478349 XDHP47989 1333 aa18.49■□□□□ 0.55
SMARCE1-209ENST00000478349 YDJCA8MPS7 323 aa18.49■□□□□ 0.55
SMARCE1-209ENST00000478349 CTSWP56202 376 aa18.49■□□□□ 0.55
SMARCE1-209ENST00000478349 TSPYL6Q8N831 410 aa18.49■□□□□ 0.55
SMARCE1-209ENST00000478349 MYH16Q9H6N6 1097 aa18.49■□□□□ 0.55
SMARCE1-209ENST00000478349 PGAP2Q9UHJ9 254 aa18.49■□□□□ 0.55
SMARCE1-209ENST00000478349 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 PSMD14O00487 310 aa18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 FOXN1O15353 648 aa18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 CELF2O95319 508 aaKnown RBP18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 WBP1LQ9NX94 342 aa18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
SMARCE1-209ENST00000478349 TRAF5O00463 557 aa18.47■□□□□ 0.55
SMARCE1-209ENST00000478349 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
SMARCE1-209ENST00000478349 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
SMARCE1-209ENST00000478349 HHIPL1Q96JK4 782 aa18.47■□□□□ 0.55
SMARCE1-209ENST00000478349 RTL9Q8NET4 1388 aa18.46■□□□□ 0.55
SMARCE1-209ENST00000478349 ATP2B4P23634 1241 aa18.46■□□□□ 0.55
SMARCE1-209ENST00000478349 DOK7Q18PE1 504 aa18.46■□□□□ 0.55
SMARCE1-209ENST00000478349 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
SMARCE1-209ENST00000478349 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
SMARCE1-209ENST00000478349 FLIIQ13045 1269 aa18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 CCDC184Q52MB2 194 aa18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 DCPSQ96C86 337 aaKnown RBP18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 GLIS2Q9BZE0 524 aaPredicted RBP18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 ZNF408Q9H9D4 720 aa18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
SMARCE1-209ENST00000478349 NEURL1BA8MQ27 555 aa18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 MAP2K2P36507 400 aa18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 IGHMBP2P38935 993 aaKnown RBP18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 GRM1Q13255 1194 aa18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 CST9Q5W186 159 aa18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 SAPCD2Q86UD0 394 aa18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 GPR101Q96P66 508 aaPredicted RBP18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 BSDC1Q9NW68 430 aaPredicted RBP18.44■□□□□ 0.54
SMARCE1-209ENST00000478349 ZNF609O15014 1411 aa18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 CA12O43570 354 aa18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 VIL1P09327 827 aaKnown RBP18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 KRT26Q7Z3Y9 468 aa18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 PODNQ7Z5L7 613 aa18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 AGBL3Q8NEM8 1001 aa18.43■□□□□ 0.54
SMARCE1-209ENST00000478349 CAPN15O75808 1086 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 HIRAP54198 1017 aaPredicted RBP18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 CWF19L2Q2TBE0 894 aaKnown RBP18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 TBC1D10BQ4KMP7 808 aaPredicted RBP18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 CYP4F22Q6NT55 531 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 SULF1Q8IWU6 871 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 LINS1Q8NG48 757 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 TTLL11Q8NHH1 800 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 DNAAF4Q8WXU2 420 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 JARID2Q92833 1246 aaPredicted RBP18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
SMARCE1-209ENST00000478349 FMR1Q06787 632 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMARCE1-209ENST00000478349 GCKRQ14397 625 aa18.41■□□□□ 0.54
SMARCE1-209ENST00000478349 SAMD7Q7Z3H4 446 aa18.41■□□□□ 0.54
SMARCE1-209ENST00000478349 PCNTO95613 3336 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 H7C1W4 665 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 LBX1P52954 281 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 RSBN1LQ6PCB5 846 aaPredicted RBP18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 MPHOSPH8Q99549 860 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 ANKRD2Q9GZV1 360 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 GREM2Q9H772 168 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 THSD7BQ9C0I4 1608 aa18.4■□□□□ 0.54
SMARCE1-209ENST00000478349 USP17L3A6NCW0 530 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 USP17L4A6NCW7 530 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 NOGQ13253 232 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 USP17L1Q7RTZ2 530 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 C2orf69Q8N8R5 385 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 LEMD3Q9Y2U8 911 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 MYO3BQ8WXR4 1341 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 TAF1P21675 1872 aa18.39■□□□□ 0.53
SMARCE1-209ENST00000478349 SHTN1A0MZ66 631 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 USP17L8P0C7I0 530 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 HSPA8P11142 646 aaKnown RBP18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 MMP14P50281 582 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 HUNKP57058 714 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 G2E3Q7L622 706 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 GGA3Q9NZ52 723 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 COL4A1P02462 1669 aa18.38■□□□□ 0.53
SMARCE1-209ENST00000478349 TRPM7Q96QT4 1865 aa18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 VAMP4O75379 141 aa18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 ITGA6P23229 1130 aa18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 KCNJ4P48050 445 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms