RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PIK3R2O00459 728 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 COL8A1P27658 744 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 SLFN5Q08AF3 891 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 SF3B2Q13435 895 aaKnown RBP6.42□□□□□ -1.38
SF3B6-202ENST00000478050 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 GGT6Q6P531 493 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 EDARADDQ8WWZ3 215 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 CRBNQ96SW2 442 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 CFHR5Q9BXR6 569 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
SF3B6-202ENST00000478050 NSD2O96028 1365 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 MED14O60244 1454 aa6.41□□□□□ -1.38
SF3B6-202ENST00000478050 WDR44Q5JSH3 913 aa6.41□□□□□ -1.38
SF3B6-202ENST00000478050 TAS1R3Q7RTX0 852 aa6.41□□□□□ -1.38
SF3B6-202ENST00000478050 TRMT2AQ8IZ69 625 aaKnown RBP6.41□□□□□ -1.38
SF3B6-202ENST00000478050 KLRG1Q96E93 195 aa6.41□□□□□ -1.38
SF3B6-202ENST00000478050 PODXL2Q9NZ53 605 aa6.41□□□□□ -1.38
SF3B6-202ENST00000478050 NOP58Q9Y2X3 529 aaKnown RBP6.41□□□□□ -1.38
SF3B6-202ENST00000478050 NINLQ9Y2I6 1382 aa6.41□□□□□ -1.38
SF3B6-202ENST00000478050 E9PSI1 815 aa6.4□□□□□ -1.38
SF3B6-202ENST00000478050 FLIIQ13045 1269 aa6.4□□□□□ -1.38
SF3B6-202ENST00000478050 EPS8L1Q8TE68 723 aa6.4□□□□□ -1.38
SF3B6-202ENST00000478050 IPO9Q96P70 1041 aaKnown RBP6.4□□□□□ -1.38
SF3B6-202ENST00000478050 GRIP2Q9C0E4 1043 aa6.4□□□□□ -1.38
SF3B6-202ENST00000478050 TRAK1Q9UPV9 953 aa6.4□□□□□ -1.38
SF3B6-202ENST00000478050 EVC2Q86UK5 1308 aa6.4□□□□□ -1.39
SF3B6-202ENST00000478050 ANKRD36BQ8N2N9 1353 aa6.4□□□□□ -1.39
SF3B6-202ENST00000478050 ADGRB2O60241 1585 aa6.4□□□□□ -1.39
SF3B6-202ENST00000478050 NWD1Q149M9 1564 aa6.4□□□□□ -1.39
SF3B6-202ENST00000478050 STRCP1A6NGW2 1772 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 C1QTNF9BB2RNN3 333 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
SF3B6-202ENST00000478050 PLIN1O60240 522 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 CENPQQ7L2Z9 268 aaPredicted RBP6.39□□□□□ -1.39
SF3B6-202ENST00000478050 MORC1Q86VD1 984 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 GOLGA6L1Q8N7Z2 621 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 C1orf115Q9H7X2 142 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 GPAMQ9HCL2 828 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 SLC52A1Q9NWF4 448 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 PCDHB9Q9Y5E1 797 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 CGNL1Q0VF96 1302 aa6.39□□□□□ -1.39
SF3B6-202ENST00000478050 SPATA31C2B4DYI2 1134 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 APBB1O00213 710 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 APAF1O14727 1248 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
SF3B6-202ENST00000478050 SKIV2LQ15477 1246 aaKnown RBP6.38□□□□□ -1.39
SF3B6-202ENST00000478050 CC2D2BQ6DHV5 1058 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 CYP2U1Q7Z449 544 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 CCDC146Q8IYE0 955 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 CFAP53Q96M91 514 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 PCMTD1Q96MG8 357 aaPredicted RBP6.38□□□□□ -1.39
SF3B6-202ENST00000478050 BACH2Q9BYV9 841 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 KDM2BQ8NHM5 1336 aa6.38□□□□□ -1.39
SF3B6-202ENST00000478050 DLC1Q96QB1 1528 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 TNRQ92752 1358 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 GNB5O14775 395 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 BMP4P12644 408 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 CLN3Q13286 438 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 TMEM132EQ6IEE7 984 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 C1orf229Q6ZS94 237 aaPredicted RBP6.37□□□□□ -1.39
SF3B6-202ENST00000478050 PROCA1Q8NCQ7 364 aaPredicted RBP6.37□□□□□ -1.39
SF3B6-202ENST00000478050 RUNDC1Q96C34 613 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 C8orf37Q96NL8 207 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 SEMA6BQ9H3T3 888 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 SUV39H2Q9H5I1 410 aa6.37□□□□□ -1.39
SF3B6-202ENST00000478050 KNDC1Q76NI1 1749 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 TMEM94Q12767 1356 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 CSB-PGBD3P0DP91 1061 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 ERVK-9P63128 1117 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 CCDC27Q2M243 656 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 ZMYM1Q5SVZ6 1142 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 C20orf194Q5TEA3 1177 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 LINC00114Q6XXX2 140 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 CD163Q86VB7 1156 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 PGBD3Q8N328 593 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 SLC12A5Q9H2X9 1139 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 NOP53Q9NZM5 478 aaKnown RBP6.36□□□□□ -1.39
SF3B6-202ENST00000478050 SLAIN2Q9P270 581 aa6.36□□□□□ -1.39
SF3B6-202ENST00000478050 YTHDC2Q9H6S0 1430 aaKnown RBP6.35□□□□□ -1.39
SF3B6-202ENST00000478050 MSH6P52701 1360 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 ABCC11Q96J66 1382 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 GTF2E1P29083 439 aaPredicted RBP6.35□□□□□ -1.39
SF3B6-202ENST00000478050 AAMPQ13685 434 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 IDI1Q13907 227 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 PDE3AQ14432 1141 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 DEFB132Q7Z7B7 95 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 WDR63Q8IWG1 891 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 WWC1Q8IX03 1113 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 CLUAP1Q96AJ1 413 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 ARHGEF10LQ9HCE6 1279 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 GOPCQ9HD26 462 aa6.35□□□□□ -1.39
SF3B6-202ENST00000478050 COL16A1Q07092 1604 aaPredicted RBP6.35□□□□□ -1.39
SF3B6-202ENST00000478050 COL3A1P02461 1466 aaPredicted RBP6.34□□□□□ -1.39
SF3B6-202ENST00000478050 MAP2P11137 1827 aaKnown RBP6.34□□□□□ -1.39
SF3B6-202ENST00000478050 USP17L8P0C7I0 530 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 PHKA2P46019 1235 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 MTHFSP49914 203 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 DOC2BQ14184 412 aa6.34□□□□□ -1.39
SF3B6-202ENST00000478050 FBXO31Q5XUX0 539 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms