RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 UTP4Q969X6 686 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-204ENST00000477988 MUC3BQ9H195 1237 aa8.13□□□□□ -1.11
NCKAP1-204ENST00000477988 KLK14Q9P0G3 267 aa8.13□□□□□ -1.11
NCKAP1-204ENST00000477988 TM4SF5O14894 197 aa8.12□□□□□ -1.11
NCKAP1-204ENST00000477988 HOXD8P13378 290 aaPredicted RBP8.12□□□□□ -1.11
NCKAP1-204ENST00000477988 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
NCKAP1-204ENST00000477988 ABI1Q8IZP0 508 aa8.12□□□□□ -1.11
NCKAP1-204ENST00000477988 CACTIN-AS1Q8N1I8 211 aa8.12□□□□□ -1.11
NCKAP1-204ENST00000477988 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
NCKAP1-204ENST00000477988 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
NCKAP1-204ENST00000477988 HINFPQ9BQA5 517 aa8.11□□□□□ -1.11
NCKAP1-204ENST00000477988 KRTAP4-11Q9BYQ6 195 aa8.11□□□□□ -1.11
NCKAP1-204ENST00000477988 TRIM33Q9UPN9 1127 aa8.11□□□□□ -1.11
NCKAP1-204ENST00000477988 MICAL2O94851 1124 aa8.1□□□□□ -1.11
NCKAP1-204ENST00000477988 GHRHP01286 108 aa8.1□□□□□ -1.11
NCKAP1-204ENST00000477988 LARP1Q6PKG0 1096 aaKnown RBP8.1□□□□□ -1.11
NCKAP1-204ENST00000477988 CLEC10AQ8IUN9 316 aa8.1□□□□□ -1.11
NCKAP1-204ENST00000477988 FAM83CQ9BQN1 747 aa8.1□□□□□ -1.11
NCKAP1-204ENST00000477988 PPME1Q9Y570 386 aa8.1□□□□□ -1.11
NCKAP1-204ENST00000477988 SOX18P35713 384 aa8.09□□□□□ -1.11
NCKAP1-204ENST00000477988 ACAD11Q709F0 780 aa8.09□□□□□ -1.11
NCKAP1-204ENST00000477988 CBLL1Q75N03 491 aa8.09□□□□□ -1.11
NCKAP1-204ENST00000477988 KCNK4Q9NYG8 393 aa8.09□□□□□ -1.11
NCKAP1-204ENST00000477988 OPLAHO14841 1288 aa8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 PSAPP07602 524 aa8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 HOXA10P31260 410 aaPredicted RBP8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 CD68P34810 354 aaPredicted RBP8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 DGKZQ13574 1117 aa8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 NSUN5Q96P11 429 aaKnown RBP8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 RTCBQ9Y3I0 505 aaKnown RBP8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 MAFBQ9Y5Q3 323 aaPredicted RBP8.08□□□□□ -1.12
NCKAP1-204ENST00000477988 MMP20O60882 483 aa8.07□□□□□ -1.12
NCKAP1-204ENST00000477988 FAM20CQ8IXL6 584 aa8.07□□□□□ -1.12
NCKAP1-204ENST00000477988 RBSNQ9H1K0 784 aa8.07□□□□□ -1.12
NCKAP1-204ENST00000477988 LINC01387J3KSC0 135 aa8.06□□□□□ -1.12
NCKAP1-204ENST00000477988 XYLBO75191 536 aa8.06□□□□□ -1.12
NCKAP1-204ENST00000477988 PTK7Q13308 1070 aa8.06□□□□□ -1.12
NCKAP1-204ENST00000477988 QTRT2Q9H974 415 aaKnown RBP8.06□□□□□ -1.12
NCKAP1-204ENST00000477988 USP20Q9Y2K6 914 aa8.06□□□□□ -1.12
NCKAP1-204ENST00000477988 FOXO3O43524 673 aa8.05□□□□□ -1.12
NCKAP1-204ENST00000477988 DPYDQ12882 1025 aa8.05□□□□□ -1.12
NCKAP1-204ENST00000477988 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
NCKAP1-204ENST00000477988 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
NCKAP1-204ENST00000477988 MYO19Q96H55 970 aa8.05□□□□□ -1.12
NCKAP1-204ENST00000477988 FAM196BA6NMK8 535 aa8.04□□□□□ -1.12
NCKAP1-204ENST00000477988 ITGB5P18084 799 aa8.04□□□□□ -1.12
NCKAP1-204ENST00000477988 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
NCKAP1-204ENST00000477988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.04□□□□□ -1.12
NCKAP1-204ENST00000477988 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 CRTC2Q53ET0 693 aaPredicted RBP8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 NFXL1Q6ZNB6 911 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 BEND4Q6ZU67 534 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 ANKMY2Q8IV38 441 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 GLMNQ92990 594 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 PIM2Q9P1W9 311 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 KCNMB2Q9Y691 235 aa8.03□□□□□ -1.12
NCKAP1-204ENST00000477988 BMP3P12645 472 aa8.02□□□□□ -1.13
NCKAP1-204ENST00000477988 WEE1P30291 646 aa8.02□□□□□ -1.13
NCKAP1-204ENST00000477988 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L15C9J2P7 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L10C9JJH3 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L13C9JLJ4 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L12C9JPN9 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L11C9JVI0 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L21D6R901 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L18D6R9N7 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L22D6RA61 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L17D6RBQ6 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L19D6RCP7 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L20D6RJB6 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 PRNPP04156 253 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 USP17L24Q0WX57 530 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 CMTR1Q8N1G2 835 aaKnown RBP8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 KLHL23Q8NBE8 558 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 VTI1AQ96AJ9 217 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 ANGEL1Q9UNK9 670 aaKnown RBP8.01□□□□□ -1.13
NCKAP1-204ENST00000477988 ADAM11O75078 769 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 LGR5O75473 907 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 JUNBP17275 347 aaPredicted RBP8□□□□□ -1.13
NCKAP1-204ENST00000477988 COL19A1Q14993 1142 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 FOXD4L4Q8WXT5 416 aaPredicted RBP8□□□□□ -1.13
NCKAP1-204ENST00000477988 COL26A1Q96A83 441 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 KCNF1Q9H3M0 494 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 HIF3AQ9Y2N7 669 aa8□□□□□ -1.13
NCKAP1-204ENST00000477988 FSCN2O14926 492 aa7.99□□□□□ -1.13
NCKAP1-204ENST00000477988 PREPP48147 710 aa7.99□□□□□ -1.13
NCKAP1-204ENST00000477988 FNBP4Q8N3X1 1017 aaPredicted RBP7.99□□□□□ -1.13
NCKAP1-204ENST00000477988 CARD10Q9BWT7 1032 aa7.99□□□□□ -1.13
NCKAP1-204ENST00000477988 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
NCKAP1-204ENST00000477988 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
NCKAP1-204ENST00000477988 DDX3YO15523 660 aaKnown RBP7.98□□□□□ -1.13
NCKAP1-204ENST00000477988 CDC27P30260 824 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms