RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CRAMP1Q96RY5 1269 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 TMX4Q9H1E5 349 aaPredicted RBP10.64□□□□□ -0.71
ERCC8-205ENST00000477893 LAMB2P55268 1798 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 PI4KAP2A4QPH2 592 aa10.63□□□□□ -0.71
ERCC8-205ENST00000477893 IRS4O14654 1257 aaPredicted RBP10.63□□□□□ -0.71
ERCC8-205ENST00000477893 HSPA6P17066 643 aa10.63□□□□□ -0.71
ERCC8-205ENST00000477893 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
ERCC8-205ENST00000477893 LARGE2Q8N3Y3 721 aa10.63□□□□□ -0.71
ERCC8-205ENST00000477893 PI4KAP1Q8N8J0 262 aa10.63□□□□□ -0.71
ERCC8-205ENST00000477893 DDX60Q8IY21 1712 aaKnown RBP10.63□□□□□ -0.71
ERCC8-205ENST00000477893 SNED1Q8TER0 1413 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 VEGFAP15692 232 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-205ENST00000477893 HTRA3P83110 453 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 GRAPQ13588 217 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 WDR63Q8IWG1 891 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
ERCC8-205ENST00000477893 GRAPLQ8TC17 118 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-205ENST00000477893 JDP2Q8WYK2 163 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-205ENST00000477893 CWC25Q9NXE8 425 aaPredicted RBP10.62□□□□□ -0.71
ERCC8-205ENST00000477893 GJA3Q9Y6H8 435 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 COL4A5P29400 1685 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
ERCC8-205ENST00000477893 COL4A1P02462 1669 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 DICER1Q9UPY3 1922 aaKnown RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 PPIP5K2O43314 1243 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 NEXNQ0ZGT2 675 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 FLIIQ13045 1269 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 FKBP5Q13451 457 aaPredicted RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 AOC3Q16853 763 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 DPP8Q6V1X1 898 aaPredicted RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 KSR2Q6VAB6 950 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 ZBTB38Q8NAP3 1195 aaPredicted RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 CELF1Q92879 486 aaKnown RBP10.61□□□□□ -0.71
ERCC8-205ENST00000477893 PSMD1Q99460 953 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 CHMP4AQ9BY43 222 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 MYH16Q9H6N6 1097 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 ATP6V0A2Q9Y487 856 aa10.61□□□□□ -0.71
ERCC8-205ENST00000477893 TAF1P21675 1872 aa10.6□□□□□ -0.71
ERCC8-205ENST00000477893 POTECB2RU33 542 aa10.6□□□□□ -0.71
ERCC8-205ENST00000477893 EAPPQ56P03 285 aaPredicted RBP10.6□□□□□ -0.71
ERCC8-205ENST00000477893 NIM1KQ8IY84 436 aa10.6□□□□□ -0.71
ERCC8-205ENST00000477893 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
ERCC8-205ENST00000477893 SMC1BQ8NDV3 1235 aa10.6□□□□□ -0.71
ERCC8-205ENST00000477893 WDR90Q96KV7 1748 aa10.6□□□□□ -0.71
ERCC8-205ENST00000477893 VAMP4O75379 141 aa10.59□□□□□ -0.71
ERCC8-205ENST00000477893 BBOX1O75936 387 aa10.59□□□□□ -0.71
ERCC8-205ENST00000477893 IGKV5-2P06315 115 aa10.59□□□□□ -0.71
ERCC8-205ENST00000477893 EIF6P56537 245 aaKnown RBP10.59□□□□□ -0.71
ERCC8-205ENST00000477893 TRIM28Q13263 835 aaKnown RBP10.59□□□□□ -0.71
ERCC8-205ENST00000477893 MPNDQ8N594 471 aa10.59□□□□□ -0.71
ERCC8-205ENST00000477893 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
ERCC8-205ENST00000477893 SEC31BQ9NQW1 1179 aa10.59□□□□□ -0.71
ERCC8-205ENST00000477893 F6X3S4 739 aa10.58□□□□□ -0.72
ERCC8-205ENST00000477893 PCCAP05165 728 aaPredicted RBP10.58□□□□□ -0.72
ERCC8-205ENST00000477893 APLP1P51693 650 aa10.58□□□□□ -0.72
ERCC8-205ENST00000477893 FSTL1Q12841 308 aa10.58□□□□□ -0.72
ERCC8-205ENST00000477893 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
ERCC8-205ENST00000477893 UBE3BQ7Z3V4 1068 aa10.58□□□□□ -0.72
ERCC8-205ENST00000477893 SP8Q8IXZ3 490 aa10.58□□□□□ -0.72
ERCC8-205ENST00000477893 NSFL1CQ9UNZ2 370 aaKnown RBP10.58□□□□□ -0.72
ERCC8-205ENST00000477893 IQCA1LA6NCM1 817 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 C6orf229H3BNL8 230 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 FZD9O00144 591 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 GPSM2P81274 684 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 CCDC152Q4G0S7 254 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 SUPT20HQ8NEM7 779 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
ERCC8-205ENST00000477893 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
ERCC8-205ENST00000477893 DUOX1Q9NRD9 1551 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 PDE8AO60658 829 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 RAD17O75943 681 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
ERCC8-205ENST00000477893 CTSWP56202 376 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 GPC2Q8N158 579 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 TAF1DQ9H5J8 278 aaPredicted RBP10.56□□□□□ -0.72
ERCC8-205ENST00000477893 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 ZNF521Q96K83 1311 aa10.56□□□□□ -0.72
ERCC8-205ENST00000477893 UFL1O94874 794 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 LMOD1P29536 600 aaPredicted RBP10.55□□□□□ -0.72
ERCC8-205ENST00000477893 EPHX2P34913 555 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 RPS8P62241 208 aaKnown RBP10.55□□□□□ -0.72
ERCC8-205ENST00000477893 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 EFCAB3Q8N7B9 438 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 CDCA7LQ96GN5 454 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 BCL2L13Q9BXK5 485 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 RTFDC1Q9BY42 306 aaPredicted RBP10.55□□□□□ -0.72
ERCC8-205ENST00000477893 GREM2Q9H772 168 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 DBNDD1Q9H9R9 158 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 ANKIB1Q9P2G1 1089 aa10.55□□□□□ -0.72
ERCC8-205ENST00000477893 LRRC37AA6NMS7 1700 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms