RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PRKAR2BP31323 418 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 DCTN1Q14203 1278 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 PRAMEF18Q5VWM3 479 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 RTF1Q92541 710 aaKnown RBP9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 RSPH6AQ9H0K4 717 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 SCAF8Q9UPN6 1271 aaKnown RBP9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 PITPNM2Q9BZ72 1349 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 DUOX1Q9NRD9 1551 aa9.8□□□□□ -0.84
SPTLC1-205ENST00000477888 CUL9Q8IWT3 2517 aa9.79□□□□□ -0.84
SPTLC1-205ENST00000477888 PTPN12Q05209 780 aaKnown RBP9.79□□□□□ -0.84
SPTLC1-205ENST00000477888 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
SPTLC1-205ENST00000477888 LRP10Q7Z4F1 713 aa9.79□□□□□ -0.84
SPTLC1-205ENST00000477888 GMLQ99445 158 aa9.79□□□□□ -0.84
SPTLC1-205ENST00000477888 KIAA0100Q14667 2235 aaKnown RBP9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 HTATSF1O43719 755 aaKnown RBP9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 MNX1P50219 401 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 INHBEP58166 350 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 GPSM2P81274 684 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 CAP1Q01518 475 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 LDLRAD1Q5T700 205 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 ZNF333Q96JL9 665 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 COL3A1P02461 1466 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-205ENST00000477888 HSPA5P11021 654 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 EIF4A1P60842 406 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 TCIRG1Q13488 830 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 TTLL12Q14166 644 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 NLRP10Q86W26 655 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 TBC1D16Q8TBP0 767 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 ERO1AQ96HE7 468 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 EYA3Q99504 573 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 PRO3102Q9H379 93 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 MYOZ2Q9NPC6 264 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 PAPPA2Q9BXP8 1791 aa9.77□□□□□ -0.85
SPTLC1-205ENST00000477888 ZNF609O15014 1411 aa9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 PDIA6Q15084 440 aa9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 CC2D1BQ5T0F9 858 aaKnown RBP9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 CD99L2Q8TCZ2 262 aa9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 ZC3H12CQ9C0D7 883 aaKnown RBP9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 EFCC1Q9HA90 598 aa9.76□□□□□ -0.85
SPTLC1-205ENST00000477888 POLR2AP24928 1970 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 IGF2BP3O00425 579 aaKnown RBP eCLIP9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 SF3B3Q15393 1217 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 NBPF9Q3BBW0 867 aa9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 ERBB4Q15303 1308 aa9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 SH3TC1Q8TE82 1336 aa9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 LAMA3Q16787 3333 aa9.75□□□□□ -0.85
SPTLC1-205ENST00000477888 CEP290O15078 2479 aa9.74□□□□□ -0.85
SPTLC1-205ENST00000477888 ARMC9Q7Z3E5 817 aa9.74□□□□□ -0.85
SPTLC1-205ENST00000477888 PNISRQ8TF01 805 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-205ENST00000477888 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
SPTLC1-205ENST00000477888 WTIPA6NIX2 430 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 WNT10BO00744 389 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 NF2P35240 595 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 SP3Q02447 781 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 CRHR2Q13324 411 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 PROSER3Q2NL68 480 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 HSP90AB3PQ58FF7 597 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 NBPF11Q86T75 865 aa9.73□□□□□ -0.85
SPTLC1-205ENST00000477888 NUP98P52948 1817 aa9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 ZBTB48P10074 688 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 RPS8P62241 208 aaKnown RBP9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 PRKG1Q13976 671 aa9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 MAP3K11Q16584 847 aa9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 SLC9C1Q4G0N8 1177 aa9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 SLC10A4Q96EP9 437 aa9.72□□□□□ -0.85
SPTLC1-205ENST00000477888 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 G3V3G9 751 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 SOX1O00570 391 aaPredicted RBP9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 ANXA1P04083 346 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 COPS6Q7L5N1 327 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 PODNQ7Z5L7 613 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 DPF3Q92784 378 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 WNK4Q96J92 1243 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 PTPN18Q99952 460 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 ANGEL1Q9UNK9 670 aaKnown RBP9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 FZD1Q9UP38 647 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 PTCH2Q9Y6C5 1203 aa9.71□□□□□ -0.86
SPTLC1-205ENST00000477888 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms