RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PMEPA1Q969W9 287 aa8.17□□□□□ -1.1
SMNDC1-205ENST00000477763 FAM129BQ96TA1 746 aa8.17□□□□□ -1.1
SMNDC1-205ENST00000477763 RBCK1Q9BYM8 510 aa8.17□□□□□ -1.1
SMNDC1-205ENST00000477763 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
SMNDC1-205ENST00000477763 LOC102724428A0A0B4J2F2 783 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 PHF20L1A8MW92 1017 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 ALBP02768 609 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 SIK1P57059 783 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 SNRPNP63162 240 aaKnown RBP8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 HYAL2Q12891 473 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 MICALL1Q8N3F8 863 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 TTC9Q92623 222 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 DCTN4Q9UJW0 460 aa8.16□□□□□ -1.1
SMNDC1-205ENST00000477763 A6NHS1 94 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 M0R082 166 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 GNB5O14775 395 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 KIF4AO95239 1232 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 PSAPL1Q6NUJ1 521 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 ZNF417Q8TAU3 575 aa8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 ZNF587Q96SQ5 575 aaPredicted RBP8.15□□□□□ -1.1
SMNDC1-205ENST00000477763 LILRB5O75023 590 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 NEFLP07196 543 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 CPB1P15086 417 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 DMRTB1Q96MA1 342 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 NSUN5Q96P11 429 aaKnown RBP8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 LPIN3Q9BQK8 851 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 CNTN3Q9P232 1028 aa8.14□□□□□ -1.11
SMNDC1-205ENST00000477763 PHACTR2O75167 634 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 RGS9O75916 674 aaPredicted RBP8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 GHRHP01286 108 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 IGHA2P01877 340 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 CES1P23141 567 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 ELMSAN1Q6PJG2 1045 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 SND1Q7KZF4 910 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 C1orf127Q8N9H9 656 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 SPOCK3Q9BQ16 436 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 CHRDQ9H2X0 955 aa8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 CCDC9Q9Y3X0 531 aaKnown RBP8.13□□□□□ -1.11
SMNDC1-205ENST00000477763 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 COL13A1Q5TAT6 717 aaPredicted RBP8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 HFE2Q6ZVN8 426 aa8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 ALKBH8Q96BT7 664 aaKnown RBP8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 SPACA7Q96KW9 195 aa8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 JPH1Q9HDC5 661 aaPredicted RBP8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 SALL4Q9UJQ4 1053 aa8.12□□□□□ -1.11
SMNDC1-205ENST00000477763 J3QW42 95 aa8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 MSTNO14793 375 aa8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 PROCP04070 461 aa8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 ALYREFQ86V81 257 aaKnown RBP8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 PLD4Q96BZ4 506 aa8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 NOP53Q9NZM5 478 aaKnown RBP8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 FOXD3Q9UJU5 478 aaPredicted RBP8.11□□□□□ -1.11
SMNDC1-205ENST00000477763 NID1P14543 1247 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 MAPK1P28482 360 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 AFF1P51825 1210 aaKnown RBP8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 NCAPG2Q86XI2 1143 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 CACTIN-AS1Q8N1I8 211 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 CEP120Q8N960 986 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 NUDT8Q8WV74 236 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 ZFYVE28Q9HCC9 887 aa8.1□□□□□ -1.11
SMNDC1-205ENST00000477763 SPDYE3A6NKU9 549 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 GPR182O15218 404 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 GRIK5Q16478 980 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 TMC7Q7Z402 723 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 TRIM11Q96F44 468 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 KANSL3Q9P2N6 904 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 AMOTL2Q9Y2J4 779 aa8.09□□□□□ -1.11
SMNDC1-205ENST00000477763 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 EREGO14944 169 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 ADAM23O75077 832 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 EDN3P14138 238 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 COL8A1P27658 744 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 ZSCAN29Q8IWY8 852 aaPredicted RBP8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
SMNDC1-205ENST00000477763 SMNDC1O75940 238 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMNDC1-205ENST00000477763 PLVAPQ9BX97 442 aa8.07□□□□□ -1.12
SMNDC1-205ENST00000477763 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
SMNDC1-205ENST00000477763 TREHO43280 583 aa8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 CPNE3O75131 537 aaKnown RBP8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 DSC3Q14574 896 aa8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 NIF3L1Q9GZT8 377 aa8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 SUV39H2Q9H5I1 410 aa8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
SMNDC1-205ENST00000477763 ATP11AP98196 1134 aa8.05□□□□□ -1.12
SMNDC1-205ENST00000477763 ORC1Q13415 861 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms